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OR1_SR1_3_8

Organism: SR1_OR1

partial RP 41 / 55 MC: 1 BSCG 22 / 51 ASCG 0 / 38
Location: comp(5414..6511)

Top 3 Functional Annotations

Value Algorithm Source
mshG; type II secretion system protein KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 348.0
  • Bit_score: 356
  • Evalue 7.20e-96
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=ACD80 UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 351.0
  • Bit_score: 344
  • Evalue 2.40e-91
similarity jgi
DB: COG
  • Identity: 28.16
  • Coverage: null
  • Bit_score: 234
  • Evalue 1.00e-62

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Taxonomy

ACD80 → SR1 → Bacteria

Sequences

DNA sequence
Length: 1098
atggtactccaaaaacctgaaaaaactaaactagatctcttaattcagagtttttctaaaccttccctcaaacacaaggtaaacttttttagacttttagcggtttctcaaaacgctggtctaggaattagagaatctattgcctcaatcaataaatctgaaacccacaagggatttaaagatatcatggatgagttgatggtttttcttacctcaggaggttctctagctgatgcaatgtcagaacactcctattttttcaattctgatgaaattgaactggtaagatcagcacaagtaacaggaaatatggctcaagtactttctcagcttgctgatgaacttgaaaatacccaagaaatcgcgcaaaaaactaaaaaagcaatgacctacccaacgatggtacttttgatggcgattggtgctgtgatcgtaatccttacaaccgtacttccacagatggtaacgatgtatccaaacccagataacctcccaggcatcacaaaattcatgcttggaatctcagattggatcaaactcaactggccatttttagcatttggagcagtaggagtagtcggaggatttagctttctgtatcaaaaggtgatcttattcagaattttcatagataaactcttcatctcgactccagtaatcaaagatgtagttaaaaccctctatatgtacaaatttgcaaatcttctctctcaattttacgaagccggggtaagtcctgttgtttcactaaaattgctagggaatatctttgaaaacttccactataaacaaaagatgatagatgtgagatcagacctagaatcaggttttaccctttatgattcactcgcctcatcaacactatttgatcctatcttgattcaaattatcaatgtgggagaaaatacaggttccctcactgatgttctcagaaagatggccatttactatcgtaatacgtataagaacactatcgatgttgcaatgtcaatgattgaaccacttttgatgatgtttgtggctgcaatcgttggtaccatcgtagcttctatcttcttaccaatggcaagtatgatggaacaagtaaatcaaatgtag
PROTEIN sequence
Length: 366
MVLQKPEKTKLDLLIQSFSKPSLKHKVNFFRLLAVSQNAGLGIRESIASINKSETHKGFKDIMDELMVFLTSGGSLADAMSEHSYFFNSDEIELVRSAQVTGNMAQVLSQLADELENTQEIAQKTKKAMTYPTMVLLMAIGAVIVILTTVLPQMVTMYPNPDNLPGITKFMLGISDWIKLNWPFLAFGAVGVVGGFSFLYQKVILFRIFIDKLFISTPVIKDVVKTLYMYKFANLLSQFYEAGVSPVVSLKLLGNIFENFHYKQKMIDVRSDLESGFTLYDSLASSTLFDPILIQIINVGENTGSLTDVLRKMAIYYRNTYKNTIDVAMSMIEPLLMMFVAAIVGTIVASIFLPMASMMEQVNQM*