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ACD18_2_8

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 8938..9483

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 172.0
  • Bit_score: 112
  • Evalue 1.20e-22
coiled-coil (db=Coil db_id=coil from=119 to=140 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=21 to=179 evalue=7.9e-35 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.90e-35

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACAGCTAAGTATCAGGAAAAACTTCTTGTACACAAAATTCAACAGGATGGAGATACTGATAGCTTCGCTGTACTTTATGATCTCTATATACAGAAGATCTACCGCTTTACTTATTTGAAGTTGGGTAGTAGAGAAGAAGCTGAAGATATCACTAGTGAAGTCTTTTTGAAGACTTGGAACTACCTCATTTCCAATCGGGATCAGGTGGTGAAGAGTTTCAGCGGACTTATCTATAGGATAGCGCGTAATACTTTGATAGATTTTTATAGACAAAATACTCATACTGAAATATCTCTAGAAGATTTGGATGATATAAGAGTAGATAATAAGATATTAAAAGAGCTGGGTGATAAACAAGAAATGCAAAGAGTTGTCAAAAATTTACAAAAAATGAAAAGAGAATATCAAGAAGTGATTTTGCTCAAATATATAGAAGAATTGAGTACTCGCGAAATATCCGAAATTTTACAAAAAAATACCACGAATGTCAGAGTCACTTTGTATAGAGCGATTAAGATTCTGAAGAAGATGTTGGAGAGATAA
PROTEIN sequence
Length: 182
MTAKYQEKLLVHKIQQDGDTDSFAVLYDLYIQKIYRFTYLKLGSREEAEDITSEVFLKTWNYLISNRDQVVKSFSGLIYRIARNTLIDFYRQNTHTEISLEDLDDIRVDNKILKELGDKQEMQRVVKNLQKMKREYQEVILLKYIEELSTREISEILQKNTTNVRVTLYRAIKILKKMLER*