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ACD18_4_6

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: comp(3337..3672)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BL50_9LACT (db=UNIREF evalue=4.0e-17 bit_score=90.1 identity=42.42 coverage=83.0357142857143) similarity UNIREF
DB: UNIREF
  • Identity: 42.42
  • Coverage: 83.04
  • Bit_score: 90
  • Evalue 4.00e-17
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 104.0
  • Bit_score: 89
  • Evalue 6.50e-16
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=10 to=108 evalue=3.0e-23 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-23

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAAATTAAGGAATGTCTCAAAAATTCAAGATGGCAAGGAAGCTTTGACTGAATATTGGGTAGAAAAAACATTTAAGAGATTTACTTTATTAAAAATAAAAATCCATAGTGGACGTACTCACCAAATTCGTGTGCATATGTTTGCGCTTGGTTGTCCCGTTGTTGGCGACAATCTTTATTTCAACAAAAAATTGCAAAAGAAGAGTGAACAAGAATTAAATAGATTATTTTTGCACGCCAAACACTTGGAATTTACAGATTTGCAAGGTGTGCGTGTAAGTTTTGACAAAAATATTCCAAAAGTTTTGAAAGATTATTTGGAGAGTTTAGTATAA
PROTEIN sequence
Length: 112
MKLRNVSKIQDGKEALTEYWVEKTFKRFTLLKIKIHSGRTHQIRVHMFALGCPVVGDNLYFNKKLQKKSEQELNRLFLHAKHLEFTDLQGVRVSFDKNIPKVLKDYLESLV*