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ACD18_23_31

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 27041..27427

Top 3 Functional Annotations

Value Algorithm Source
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 121.0
  • Bit_score: 144
  • Evalue 2.60e-32
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=2 to=114 evalue=2.8e-63 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.80e-63
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=122 evalue=1.5e-47) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-47

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGCGTGTCTCTGGAGTAAATATACCAAATGAAAAAAGAGTTCTTGTAGCTCTTACTTATGTGTACGGTATTGGTTCAACAACTGCCAAGAAAATCTTGGAACAAGCTCAAGTACCACTAACTACACGTACTAAAGATCTTACTCAAGATCAAGAAGATAAAATTCGTAATTTAGTCGAAAAAGGACATAAAACAGAAGGTGACTTGCGTCGTGAAGTTTCTTCAAATATCAAACGTTTGAAAGATATTAAATCTTACCGTGGCACACGTCATGCTAAGAGATTACCATCACGTGGTCAAAGAACTAAGACTAACAGTCGTACTACTCGTGGTAATAAGAGAAATGTGGCAACTAGTGGTAAAAAACCTACTGCCCAAAAGACCTAA
PROTEIN sequence
Length: 129
MRVSGVNIPNEKRVLVALTYVYGIGSTTAKKILEQAQVPLTTRTKDLTQDQEDKIRNLVEKGHKTEGDLRREVSSNIKRLKDIKSYRGTRHAKRLPSRGQRTKTNSRTTRGNKRNVATSGKKPTAQKT*