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ACD18_23_33

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 27875..28498

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 207.0
  • Bit_score: 180
  • Evalue 4.00e-43
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=206 evalue=1.6e-73 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-73
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=206 evalue=5.3e-51) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.30e-51

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGGAAGAAATATTGGACCAAAAAATAAAATTGCTAGACGTTTCAAAACTAATTTAGGTTTGAAAACTAATGCTGCAAAAGTTGCTCGTCGTCTTAATCAAGCTCCTGGTGTACATGGGCCTAATCAAAGACGTGTTTCTTTGTCATCATTTGGTAAGCAATTATTAGAAAAACAAAAAGCTAAAGTTGTTTACGGTATTCGTGAAAAACAATTTCGTAAATATGTAGAAAAAGCTAGTGATATGACAGGTGACTCTGGTGTCAACTTGCAAGAAATGTTAGAAATGCGTATGGACAACGTTGTTTATCGTATGGGTTTTGCAACTACTCGTGCTCAAGCTAGACAATTTGTTAGTCATAGTATGTTTACTTTGAATGGTAAAAAAATGAATATCCCTTCACATATCGTACGTGTTGGTGATATAATTGCTTTGAAAGAAAACAAACAAAAGAAACAAATTTTTGAAAACGTTAGTGATAGATTACAATCACAAGAAGTAGCATCTTGGATTTTAGTAGATGCTGCAGCTAAATCTGGTAAAATTTTGACTAAACCTACTGAAAGAGATTTCGAAAAGGTTTTCGACGTTAAGCTTATCACTGAGTATTACTCAACTAGATAA
PROTEIN sequence
Length: 208
MGRNIGPKNKIARRFKTNLGLKTNAAKVARRLNQAPGVHGPNQRRVSLSSFGKQLLEKQKAKVVYGIREKQFRKYVEKASDMTGDSGVNLQEMLEMRMDNVVYRMGFATTRAQARQFVSHSMFTLNGKKMNIPSHIVRVGDIIALKENKQKKQIFENVSDRLQSQEVASWILVDAAAKSGKILTKPTERDFEKVFDVKLITEYYSTR*