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ACD18_30_4

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 2358..2774

Top 3 Functional Annotations

Value Algorithm Source
putative transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 140.0
  • Bit_score: 129
  • Evalue 7.10e-28
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=3 to=138 evalue=7.4e-56 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.40e-56
NusB (db=HMMPfam db_id=PF01029 from=7 to=136 evalue=2.2e-38 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-38

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGTCCAAACGCCATTTAGCTAGAGCCATTATTATGCAAGTTTTGTACCAATGGGATTTCCGTGGAAACCCTACTAGTGCTATACCTGCTATTATCGACCAAAACATGGCTGAATTTGGTATGGGATTAGAAGAAAGTAAAGATTTTATTGAAGAGACTATAAATGATATAATTGAAAAACAACCAGATATAGATGGACTAATAGAAAAGTTTGCTCCACATTGGCCACTTGATCAAATAAATTTAGTGGACAAAAACATTTTACGTCTAGGTGTTTATGAATTAGAATATAATAATAAAGAAATACCACCAAAAGTAGCCATTAATGAAGCTATTGAACTAGCCAAGACTTATGGTGGCGAAAATTCTGGTAAATTTATCAATGGTATCTTAGGTGCCATGTACAAAGATATCTAA
PROTEIN sequence
Length: 139
MSKRHLARAIIMQVLYQWDFRGNPTSAIPAIIDQNMAEFGMGLEESKDFIEETINDIIEKQPDIDGLIEKFAPHWPLDQINLVDKNILRLGVYELEYNNKEIPPKVAINEAIELAKTYGGENSGKFINGILGAMYKDI*