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ACD18_47_22

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 12360..12905

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 181.0
  • Bit_score: 192
  • Evalue 1.20e-46
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=176 evalue=3.1e-95 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-95

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGTCACGTATCGGAAAACAAATAATTAGTATTCCTGCCGGCGTTACTGTCAATATGACTGATGCTAGTATTGAGGTAAAAGGACCAAAAGGAACACTAGTAAGACAATTGAACGATAAAGTAAAAATAAAAATGGCTGACAATACTTTGACAGTTGACGTTGAAAATAAAGAAGATAAAAAAGAAAGATCTCTTTGGGGTACTTTTGGTGCACATTTGAACAATATGATCTTGGGTGTAACAGAAGGTTTCAAAAAAGAACTAGAAATCAATGGTGTTGGTTACAAAGTTGCAATGCAAGGTAAAGACCTAAAATTAGAAGTTGGTTTTTCTCATCCTGTAATTTTCAAAATACCAGATTCTGTTGTTGCTAAAGTTGAAAAAAATGTAATTACTTTAGAATCTTACGACAAAGAAATGTTGGGTAGTATTGCTGCTGAAATCAGATCTGTTAGAAAACCTGAACCTTACAAAGGTAAAGGTATTAAATATATGGAAGAAATCATCAGACGTAAAGCTGGTAAGACTGCAGCCAAAGGTGAATAA
PROTEIN sequence
Length: 182
MSRIGKQIISIPAGVTVNMTDASIEVKGPKGTLVRQLNDKVKIKMADNTLTVDVENKEDKKERSLWGTFGAHLNNMILGVTEGFKKELEINGVGYKVAMQGKDLKLEVGFSHPVIFKIPDSVVAKVEKNVITLESYDKEMLGSIAAEIRSVRKPEPYKGKGIKYMEEIIRRKAGKTAAKGE*