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ACD18_47_6

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 4442..4783

Top 3 Functional Annotations

Value Algorithm Source
rpsJ; 30S ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 101.0
  • Bit_score: 131
  • Evalue 1.20e-28
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=39 to=54 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=14 to=112 evalue=5.2e-53 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.20e-53

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGTCAGACAACGCAAATAACACAAACAACAAAGCAGAAAGTAAGTTACGTATCAAAATCAAATCTTATGATAGTAAAATTTTGGATATCGCTACCAAAACTATTATCGACACTGCAGAAAGAAATAGTGTAAAAGTAGTTGGTCCAGTACCACTTCCTACAAATATCAATAAATACAGTGTTAACAGAGCTACTTTTGTTCACAAAACAGCTCAAGAACAATTTGAAATGCGTACACACAAACGTCTTATCGATATTTTAAATCCAACCCCAAAGGCTATTGATGCTCTTATGAATTTGAACTTGCCAAGTGGTGTGGACGTAGAAATAAAGATGATGTAA
PROTEIN sequence
Length: 114
MSDNANNTNNKAESKLRIKIKSYDSKILDIATKTIIDTAERNSVKVVGPVPLPTNINKYSVNRATFVHKTAQEQFEMRTHKRLIDILNPTPKAIDALMNLNLPSGVDVEIKMM*