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GWF1_Sphingobium_63_6_gwf1_scaffold_4187_5

Organism: Sphingomonadales bacterium GWF1_63_6

near complete RP 46 / 55 MC: 3 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(5993..6502)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPW8_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 165.0
  • Bit_score: 141
  • Evalue 6.00e-31
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Sphingomonadales_63_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 332
  • Evalue 2.60e-88
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 165.0
  • Bit_score: 141
  • Evalue 1.70e-31

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Taxonomy

GWF1_Sphingomonadales_63_6_curated → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
CGTGCTCGTCTCGATTCGCTGTTTCGAGAGGAGTCGCCGCGCCTTCTTTCCTATTTCAGACGCAAAACCGGCGACCACGATGCAGCGAATGATCTCATGCAGGAGAGCTTTGTGCAGATCGTACAGGTTTCGCGCTTCGCCGATCTGGCAAATCCCGCAGCCTATCTGCAACGCATTGCGAGAAATCTGCTTTTCAGCCAATTTCGTGGTCCCAGAAAGGCATTCGAGCGACAGTTGGTCGCCCTCGACGACAATTCCGATATCGCATTACCGCCGCAGCAGGAGGCAAGCATTGAGGCCGATCAGTTGCTGCTCCTCTATGAGCAGGCGTTAGACGACATGGCGCCCAAGACGCGGGAGATTTTCCTGATGAGCCGACGCGATGGAATGACCTACAAGCAGATACAGACTGAGGTATCGCTGAGCATGGGCACCGTCGAATATCATATGATGCGCGCCATCGCTCACATTGACCGCTATCTGGACGACCATGGTGAAAATGCCCGCTGA
PROTEIN sequence
Length: 170
RARLDSLFREESPRLLSYFRRKTGDHDAANDLMQESFVQIVQVSRFADLANPAAYLQRIARNLLFSQFRGPRKAFERQLVALDDNSDIALPPQQEASIEADQLLLLYEQALDDMAPKTREIFLMSRRDGMTYKQIQTEVSLSMGTVEYHMMRAIAHIDRYLDDHGENAR*