ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5232_9

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_34

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 5 / 38
Location: 7959..8633

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein Noc_0236 n=2 Tax=Nitrosococcus oceani RepID=Y236_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 224.0
  • Bit_score: 307
  • Evalue 1.10e-80
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RBG_16_Gamma2_65_34_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 437
  • Evalue 9.80e-120
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 224.0
  • Bit_score: 307
  • Evalue 3.10e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gamma2_65_34_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGGCGATCACCGACTGGCCCACGGAAGAGCGACCGCGCGAGAAGCTCCTGGCGCGCGGGCCCCAAAACCTGTCCGACGCCGAGCTGCTTGCCATTTTCCTGCGCACCGGGCCGCGCGGCAAAACGGCGGTGGACCTGGCGCGCGAGCTGCTGGCGCGCTTCGGCGGCCTGCGCGAGCTGCTCCAGGCCGACGCCGAAACCCTGTGCGCCGCCCCGGGTCTGGGCACGGCCAAGTACGCGCAGATCCAGGCCGCAGTCGAGCTCGGGCGGCGCTCGGCTGCGCAGCGGCTCATGCGGGGCGCGGCCCTTAATTCCACCCGCGACACCATGAATTTCCTCCAGGCGCAGTTGCGCGACCGGGCGCATGAGGTTTTCTGCTGCCTCTACCTCGACAACCGCCACCGGGTGCTCGGCTTCGAGGAGCTGTTCCGCGGCACTCTGGACGGCACAGCCGTCTATCCGCGGGAGATCGTCAAGCAGGCAATCGCCCGCAACGCCGCGGCGGTAATCCTGGTGCACAACCACCCCTCGGGGGCGGCCGAGCCCAGCCGGGCGGACGAGGTGCTCACCGGCAGGCTCAAGGAGGCCCTGGCATTGGTGGATATAAGGCTTCTGGACCACCTGGTGGTGGGTGACGGCGAGATGGTGTCTCTGAGCGAGCGCGGGATGATCTGA
PROTEIN sequence
Length: 225
MAITDWPTEERPREKLLARGPQNLSDAELLAIFLRTGPRGKTAVDLARELLARFGGLRELLQADAETLCAAPGLGTAKYAQIQAAVELGRRSAAQRLMRGAALNSTRDTMNFLQAQLRDRAHEVFCCLYLDNRHRVLGFEELFRGTLDGTAVYPREIVKQAIARNAAAVILVHNHPSGAAEPSRADEVLTGRLKEALALVDIRLLDHLVVGDGEMVSLSERGMI*