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RBG_16_NSX_64_22_RBG_16_scaffold_34940_3

Organism: Nitrospirae bacterium RBG_16_64_22

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(1252..1791)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal subunit interface protein Tax=RBG_16_Nitrospirae_64_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 357
  • Evalue 1.00e-95
Cold-shock protein DNA-binding protein id=2032279 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 183.0
  • Bit_score: 223
  • Evalue 1.30e-55
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 215
  • Evalue 1.70e-53

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Taxonomy

RBG_16_Nitrospirae_64_22_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 540
ATGAAGCTTCCACTACAGATCACGGTCCGGAACATCTCCCTTTCCACGGCGGCGGAAGACAACATCCGCGAGAAGGCCGCCAAGCTGGACGGCTTCTACGAGAGCATCATGAGCTGTCGCGTCGTCGTGGAAGCTCCCCACAAGCGGCACCACAAGGGAGTGCTCTACAACGTCAGGATCGACATGACCGTGCCCGGTTCGGAACTGGTCGTCAAGCGCGAGCCCCACGAGGACTTGTACGTGGCGATCCGCGACGCCTTCGATGCCGCGCGACGACAACTGGAAGAGCACGTCCGGCGCCAGCGCGAGGCGCCCAAGACGGAGACAGCGCGCGAGGCACCCGCATACGCCCGCGTCGCGCGCCTCTTCTCCGCGCAGGACCACGGTTTCCTCGAGACGCACGACGGCCGCGAGGTCTACTTCCACCGGAACAGCGTGTTGAACGGCGGTTTCGACCGCCTGAAGGTCGGGGTCGAGGTGCGCTATACCGAGGAGCTGGGGGAGAAGGGACCGCAGGCGAGCACAGTCGCCTTGCGGTAG
PROTEIN sequence
Length: 180
MKLPLQITVRNISLSTAAEDNIREKAAKLDGFYESIMSCRVVVEAPHKRHHKGVLYNVRIDMTVPGSELVVKREPHEDLYVAIRDAFDAARRQLEEHVRRQREAPKTETAREAPAYARVARLFSAQDHGFLETHDGREVYFHRNSVLNGGFDRLKVGVEVRYTEELGEKGPQASTVALR*