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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_5801_28

Organism: Candidatus Portnoybacteria bacterium RIFCSPHIGHO2_02_FULL_39_12

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: 23951..24220

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 172
  • Evalue 3.10e-40
DNA-binding protein HupA id=3506549 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 94.0
  • Bit_score: 116
  • Evalue 1.90e-23
DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 90.0
  • Bit_score: 114
  • Evalue 1.20e-23

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Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACTAAAGACGAACTTATTGAAGCAATAGCCAGTCATTGTGATTCTAAAAAACAGGCCTCTGAAGTGGTTAACGCAGTGCTTGACGCCATTACCAAGGCTTTGAGTAAGGGAGATAAAGTGGCTTTGACCGGCTTTGGTGTTTTTAGTATTTCCAATCGGGCGGCCAGAACCGGCGTTAATCCCCGCACCGGAGAAAAAATTAAGATTGCCGCGACCAAGGTCCCGAAATTTAAAGCCGGTAAAGCCCTAAAAGACGCGGTGAAATAA
PROTEIN sequence
Length: 90
MTKDELIEAIASHCDSKKQASEVVNAVLDAITKALSKGDKVALTGFGVFSISNRAARTGVNPRTGEKIKIAATKVPKFKAGKALKDAVK*