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gwc1_scaffold_302_27

Organism: GWC1_OD1_42_11

near complete RP 41 / 55 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(26280..27545)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWC1_OD1_42_11 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 820
  • Evalue 1.00e-234
RNA polymerase, sigma 70 subunit, rpod subfamily KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 421.0
  • Bit_score: 379
  • Evalue 1.60e-102
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 377
  • Evalue 4.00e+00

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Taxonomy

GWC1_OD1_42_11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCCAAATAACAAAAATACAAAAAAGCCTAGCACAAAAAAGGCAGTAAAGAAGACCGCCAAAAAACCTCCCAAAAGAGATGTTAGGAAGAATGTAGTTTCAAAAAAGCCCGTGAAAAAGGCTATCAAAAAAGCTATTGTAAAAAAAGTAGTTGTAAAGAAGGCTACAAAAAAAGTTCCAACAAAGAAAAGTTCGACGGAGGGGTGGGAGCAAAAAGCGCAACTTCTTATTTTGAAAGGTCGCGGACGTGGTTTTATCACATATAATGAAATTCTAAAAGAGTTTCCTGCAGTTGAGCAAGATGTTATTTTTCTTGACACTCTGTATGAGAAGCTTGGTGATGCTGGTGTGGATATTCTCGAAAGTGGCGGGCTACTTGACCTTGAGCCGGAAGAAGTTTTGACCCATAAAAAATATACTTACAAGAGTGGTGATTCATCATACGACTCTATTCAAATGTATTTGAAGGAAATCGGTCAGTACCCGCTTCTCTCAGCGAGTGAGGAGCGCGACCTCGCCCAGCGTATCGAGCTTGGCGACGAAGAGGGGAAAAACCTTCTCGCGCGAGCGAATCTCCGCCTCGTAGTATCTATTGCAAAGAAATATGTTGGCAGAAGCGCTGACCTAACCCTCCTAGACCTTATTCAAGAAGGGAACATTGGCCTTTTTAAGGCTGTTGAAAAGTTTGACTGGGAAAAAGGATACAAGTTTTCTACATATGCGACATGGTGGATTCGCCAGGCTATTACACGCGCTCTTGCGGATCAGTCGCGTACAATCCGTATCCCTGTGCACATGGTGGAGACAATCTCAAAATATAAGCAGGTCGTACGTCGCCTGTCGCAGGACCTAGGGCGCGAACCACTTCCTGGAGAAGTTGCTACTGAAATGGGGCTTGATGTTGAAAAGATTTATAACATCAAAAAAATTGATCAGGATACCGTGTCCCTCGAAAAGCCGATCGGTGATGATGATGACAAATCTACTCTAGGCGAATTTATTGCAGACGACAAGATTCTTTCACCAGCACAGGACTCGGCACAGCGTATTCTGTCTGACCAAGTAAAGGAAATCCTAAATGACCTTTCTGAAAAGGAGCGTAAGATACTTGAACTTAGGCACGGGCTTGTTGATGGAGTAGTCCATACACTAGAAGAAGTAGGTCGTGAGTTTCAGGTTACTCGTGAGCGTATCCGACAGATTGAAGCAAAAGCGATTGAAAAGATTCGATCCCATGATAAAGTGGATAAGCTGCGAAATTACTAG
PROTEIN sequence
Length: 422
MPNNKNTKKPSTKKAVKKTAKKPPKRDVRKNVVSKKPVKKAIKKAIVKKVVVKKATKKVPTKKSSTEGWEQKAQLLILKGRGRGFITYNEILKEFPAVEQDVIFLDTLYEKLGDAGVDILESGGLLDLEPEEVLTHKKYTYKSGDSSYDSIQMYLKEIGQYPLLSASEERDLAQRIELGDEEGKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNIGLFKAVEKFDWEKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPGEVATEMGLDVEKIYNIKKIDQDTVSLEKPIGDDDDKSTLGEFIADDKILSPAQDSAQRILSDQVKEILNDLSEKERKILELRHGLVDGVVHTLEEVGREFQVTRERIRQIEAKAIEKIRSHDKVDKLRNY*