ggKbase home page

RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_284_38

Organism: Rhodobacterales bacterium RIFCSPHIGHO2_12_FULL_62_75

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(41176..43518)

Top 3 Functional Annotations

Value Algorithm Source
CagE TrbE VirB component of type IV transporter system n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 780.0
  • Bit_score: 1477
  • Evalue 0.0
VirB4 type IV secretion system protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 780.0
  • Bit_score: 1529
  • Evalue 0.0
type IV secretion system protein VirB similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 773.0
  • Bit_score: 606
  • Evalue 8.50e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2343
ATGTTTCTTGAACGGGAAGGGTTGAAGGGCAGGGCGCGGGCGTTGCTCCCTGCTGACCCAAAGATCTATGCGCATCTGCCTTATGTCATCGAGCTTGATGACGAGGTGGTGCGCACCCGCGACAATGGCTTGATGATCTCGCTCGAGGTGACGGGCATCGACGGGATTACATCCGGGTCATCCGCAATCACCGCCCTGAGGGCCGGCTTCGCTCATCTCCTCGACACTCTGGATGAACGTTTCAGCTTCTATCTGCACCGGATGATGCGCCCAGCCCAAGCGGCGCTGACACCCATCCTCGGCCAAAGCTTTGCCGCCGATATCGACCGGGCTTGGAGTTCCGAGCTGCAGCGCCGCAATCTGCAGGAATCCGTGCTGATCCTGACGGTCGTTCGGCGGCAGGTTGCCCCGCTGGCGGTGCCACTCTTTGGCAAGGCGGCGGCCAAGGTCTGGGGTGAGGATACAGGCCGGCGATTGGAAGAATTGCGCGAGGTGGTCTCGATCCTTGAGACCGGGCTTGGCGTGAAATCCCATCGCCTCAAGATCGGTGACGGCAGTCTGATTGGGTTCTATGCCTCGCTTTTGACGGGCGAACTCCGCAACAAACCCCGCAGCGCTTTCGGCATCATTGCTGAGGATGCCAGCGATGCCGCCATCCAGTTTGGCAAAGGCCAGTTTGCGGTAGAAGAGGGCGCAGACGCGCCTCGCGTCGGCGCTGTCCTTTATGTCAAATCCTATGCCACTTCGACCTGGCCCGGCATGCTGGATGCATTGGGCGCGTCCCGCGACACCATCATCACCCACAGCTACACGCCCATTGAGCGCGGCAGCATCACCGAGCGCGTGAAACGCCGGGTCGCCCAAATGCGGGCATCTGAGGACATCGCAGCCACGATCGAAGCGCAGCTCTTCGAGGCCGCCGATAAGTCGGAAAGCGGCGAGCTCGGGTTTGGCATCCACCAGATGACCATCACGGTCTTTGCAGGCGATCAGGCAGCTCTCGACACCGAAGTCGCACGCATTCGCGGTATTGCACATCAAAACGGCATGCGGTTGGTTCGCGAAGTCACAGCGCTCGAGGCCGCCTTCTTCGCCATGCACCCCGGCAATATGGATTACCGGGCACGCGACATGACGGTCTCGTCCCTGAACTTCGCCGATATGGCAGCTCTGCATGCGGCCGACACCGGGACGGAAGCTGCGCGGCTTCCATGGCAAACGCCGCTCACGCTGTTTCAGACGCTGCAAGGCTCGCTGCATCGGTTCAGCTTCCATGAACCCGGCGACCCAAAGGCGGAACCGACCAACGGTCACACCCTCGTTTTGGGCAAATCCGGTGGTGGCAAAACCACCACTGTCGCCTTCCTCGCAGCCCAAGCCCAAAGGGCAGGGGGCCGCACGATCATCTTCGACAAGGAAGCCGGCCTCAAAATGGCGGTCCGCGCCCTTGGCGGTCGCTATGCCGAAATACGAGCTGGGCGTCCAACCGGGTTGAACCCACTCGCCACGGAATCCGGTGAGCGTGGTGAGGCATGGTTTCTAGACTGGCTGGTGGCACTGCTCGAGTCCCGCAGCGGACCAATGACCCCACTGCAATCCGAGGCCCTCAAGTCAGCCATTTCCCAGAACGGCAAAGCCCGCGAAGGATTGCGCAACTTCCGCGCGTTTCAGGAACTGTTCGGGGATGTCGGCGACGGCCTCGATCTCGCGCAGAGGATCAGCGAATGGGGGCCGGAAGGCCGCTATGGCTGGGTCTTTGGGGAGGCTTATGAGCCAGTAGTGGATTTCACCAGCCATGATGTGACGGCCGTCGATCTGACAGAAATCCTCGACCTCGGCACCGAACGCACTGCGATCCTCGGCTATCTCTTCCGCTGCATCGAGATGCAGATCGAAGAAAAGCGGTCGACGCTGATCCTGATCGACGAGGCCTGGAAGGTGCTCGACGACGAGTATTTCGCCAAGAAGCTTGCCGAATGGCTGGTGACCGCGCGCAAGAAGAACGTCGTCGTGGTGATGATGACCCAGTTTCCAAGCCAGATCCGCGGATCGAAAGCCCGCTCGATCCTCGAGGCGCTGCCGAACCAACTTCTGTTCCCAAACGGCGAAGCGGCAAGTGCCGACTATGATGGGTTCCGGCTGACCGACGGTGAGTTGGACTTTGTCCTGAGCCCGATCCCGGGCCAGCGGATGGTGCTGTCGCGCACGCCGCGCAGCTCGACTGTGCTGAATGTCGATCTCAAAACCCTGGGGCCGCTTCTGACGGCGCTTGGCGGCGGTCAGGCCGGGCTGAATGCCTTTGGTGCCGACTATGCCCAACGCTCGAAATTCTGGAAGGAATGA
PROTEIN sequence
Length: 781
MFLEREGLKGRARALLPADPKIYAHLPYVIELDDEVVRTRDNGLMISLEVTGIDGITSGSSAITALRAGFAHLLDTLDERFSFYLHRMMRPAQAALTPILGQSFAADIDRAWSSELQRRNLQESVLILTVVRRQVAPLAVPLFGKAAAKVWGEDTGRRLEELREVVSILETGLGVKSHRLKIGDGSLIGFYASLLTGELRNKPRSAFGIIAEDASDAAIQFGKGQFAVEEGADAPRVGAVLYVKSYATSTWPGMLDALGASRDTIITHSYTPIERGSITERVKRRVAQMRASEDIAATIEAQLFEAADKSESGELGFGIHQMTITVFAGDQAALDTEVARIRGIAHQNGMRLVREVTALEAAFFAMHPGNMDYRARDMTVSSLNFADMAALHAADTGTEAARLPWQTPLTLFQTLQGSLHRFSFHEPGDPKAEPTNGHTLVLGKSGGGKTTTVAFLAAQAQRAGGRTIIFDKEAGLKMAVRALGGRYAEIRAGRPTGLNPLATESGERGEAWFLDWLVALLESRSGPMTPLQSEALKSAISQNGKAREGLRNFRAFQELFGDVGDGLDLAQRISEWGPEGRYGWVFGEAYEPVVDFTSHDVTAVDLTEILDLGTERTAILGYLFRCIEMQIEEKRSTLILIDEAWKVLDDEYFAKKLAEWLVTARKKNVVVVMMTQFPSQIRGSKARSILEALPNQLLFPNGEAASADYDGFRLTDGELDFVLSPIPGQRMVLSRTPRSSTVLNVDLKTLGPLLTALGGGQAGLNAFGADYAQRSKFWKE*