ggKbase home page

RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_rifcsphigho2_12_scaffold_49_15

Organism: Rhodobacterales bacterium RIFCSPHIGHO2_12_FULL_62_75

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 20798..21286

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EB5E3F similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 161.0
  • Bit_score: 153
  • Evalue 1.90e-34
hypothetical protein; K11903 type VI secretion system secreted protein Hcp Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 324
  • Evalue 6.70e-86
Hcp1 family type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 161.0
  • Bit_score: 153
  • Evalue 7.00e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCTGTAGAAATTTTCCTCGAGCTGCCCGATGTTGAAGGTGAGTCGCTGAAAAGCGGTTTCGAAGGCAAGATCGACATTCTGCAATATTCCTGGGCATCGTCCCAGTCGGCCACCCGCCACAGCGGCACGGGCGGCGGCAGCGGTCAGGCCAACGTCGGCGACATCCATTTCTCGAAGTATCTGGATAAATCGACCCCTGTGCTTTTCAAGACCCTGCTGATGGGCAAGCACTATGACACCGGCACCCTGACGGTTCGCAAGGTTACCGGCGGCAAGCCGCTGGATTATCTGGTGATCAAGCTGGAAGAGGTCATCATCTCGAGCTACCAGACCGGCGGTGGCGCGGGCGGGGATGACCGCATCATTGAGAACATGTCGCTGAACTTCCGCAAGTTCGACATGATTTACACCGTGCAAGAAGGCAAGGGTGCTGGCTCGGCTCAGGTGCCGGTGTCTTACGACATCGCCGTCGGCCCCGAGGCATAA
PROTEIN sequence
Length: 163
MAVEIFLELPDVEGESLKSGFEGKIDILQYSWASSQSATRHSGTGGGSGQANVGDIHFSKYLDKSTPVLFKTLLMGKHYDTGTLTVRKVTGGKPLDYLVIKLEEVIISSYQTGGGAGGDDRIIENMSLNFRKFDMIYTVQEGKGAGSAQVPVSYDIAVGPEA*