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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591

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Displaying items 61-90 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_61
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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53762..54187
DNA (426bp) protein (142aa)
infC; protein InfC; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=5803010 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infC; translation initiation factor IF-3
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_62
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

54223..54411
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_63
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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54413..54760
DNA (348bp) protein (116aa)
50S ribosomal protein L20 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
50S ribosomal protein L20 id=4731750 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
50S ribosomal protein L20
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_64

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comp(54750..55514)
DNA (765bp) protein (255aa)
ABC-3 protein {ECO:0000313|EMBL:KKU29966.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
ABC-3 protein id=2008714 bin=GWB2_Proteobacteria_55_19 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ABC transporter permease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_65

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comp(55501..56208)
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29967.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
ABC transporter related protein id=4838948 bin=GWC2_OD1_43_27 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_66
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

56262..56717
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_67
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(56754..58547)
DNA (1794bp) protein (598aa)
DNA polymerase X family (EC:2.7.7.7) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000376CF9B
DNA polymerase IV (family X)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_68

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comp(59092..59748)
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29557.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Putative uncharacterized protein id=4731752 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_69

Not on your lists

comp(59772..59987)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036B6A62
Uncharacterized protein {ECO:0000313|EMBL:KKU29971.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_70
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

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comp(59980..60225)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036E2F04
Uncharacterized protein {ECO:0000313|EMBL:KKU12870.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_71
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(60342..61343)
DNA (1002bp) protein (334aa)
DNA polymerase, bacteriophage-type; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036739CA
DNA polymerase, bacteriophage-type
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_72

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comp(61340..61972)
DNA (633bp) protein (211aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=uncultured bacterium RepID=K1WYI4_9BACT
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:KKT29561.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RNA-directed DNA polymerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_73

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62099..62284
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29975.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_74
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(62208..62462)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_75
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(62747..63616)
DNA (870bp) protein (290aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_76
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(63718..64347)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B45D7
Uncharacterized protein {ECO:0000313|EMBL:KKU12724.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
putative membrane-associated protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_77

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64387..67059
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUL3_9BACT
ATPase {ECO:0000313|EMBL:KKU29979.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
P-type HAD superfamily ATPase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_78
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(67047..68183)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035FC8C5
Uncharacterized protein {ECO:0000313|EMBL:KKU12727.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
aromatic amino acid permease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_79

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comp(68170..68625)
DNA (456bp) protein (152aa)
MgtC/SapB transporter {ECO:0000313|EMBL:KKU29981.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
MgtC family magnesium (Mg2+) transporter id=2934053 bin=GWC1_OD1_38_17 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
MgtC/SapB transporter
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_80
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(68634..69206)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12729.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_81
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

69780..69944
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_82
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(69949..70173)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DER0_9BACT
putative periplasmic or secreted lipoprotein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
putative periplasmic or secreted lipoprotein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_83
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(70179..70430)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12732.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
hypothetical protein id=43542 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_84

Not on your lists

comp(70578..70973)
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29985.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
PIN domain-like id=15191766 bin=GWC1_OP11_49_16_COMPLETE species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_85
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(70977..71177)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_86

Not on your lists

comp(71245..72585)
DNA (1341bp) protein (447aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29986.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
amt:Amet_0777 RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein id=133276 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
putative exonuclease of the beta-lactamase fold involved in RNA processing
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_87

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comp(72586..73059)
DNA (474bp) protein (158aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKU29987.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein id=1273325 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_88

Not on your lists

comp(73061..73654)
DNA (594bp) protein (198aa)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KKU29988.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein id=5801460 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
nucleoside-diphosphate kinase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_89

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73746..74168
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29989.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
id=3506553 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_90

Not on your lists

74165..74575
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BMT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKU29990.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
Displaying items 61-90 of 183 in total

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