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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_32597_17

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(15860..16780)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 597
  • Evalue 1.00e-167
HTH-type transcriptional regulator soxR id=12555865 bin=CNBR_ACIDO species=Paenibacillus sp. JC66 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 303.0
  • Bit_score: 347
  • Evalue 1.70e-92
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 304.0
  • Bit_score: 170
  • Evalue 1.00e-39

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGACCTGCGCCAGCTCGAAATCCTCCAGGCGATCGCCGAAACGGGCTCCTTTACCGCCTGCGGAAAAAAGCTCCACGTGTCGCAGTCGGCCATCAGCCGCCAGGTGCTCTTGCTCGAAGAGGAGCTGGGCGAGCCGCTGTTCCTGCGCGTGGGCCGCAAGGTCCGCATGACGCCGGCCGCCGAAAGCCTCGTCCAACTCGGCCAGCGCGTCTTCCAGGATGTCCGGGACACGGTCGGCGCCATCACCGACCGGACGCGCACGCTGCGGGGCACGCTGCGTCTCTCGGGTGGCATGACGGTGTGCCTCTACGTGTTCCCGCCGCTCCTCAAGCACCTCAAGCGCGTGCATCCGCAGCTCGACGTGCGGCTCACTGTGGCCACGGCGGAACGGTCGGTTCTCGAGATTCGCGCCGGGCGCGTGGACATCGGACTGCTGACGCTCCCCATCAACGAGTCGGATCTGGTGGCCGTCCCGGTCATGCGCGAGGAACTGCTCGTCGTCATGCCGCCTGGGCACCCGCTGGCCAGACGGCGGCGCGTCGCGCCACGCGACCTGGCAGGACAGCCGTTCATTCTGTTCGAGGTCGGTTCGGCGACCCGGCGGGTCATCGATCACTTCTTCACCGCCGAGAACATCACGCCCACGATCGTCATGGACACCGAGAACGTGGAGATCATCAAGGCGATGGTGAAGACCGGCCTCGGCATCGGGATCGTGCCGTACCAGGCGATCGCGCGCGAAGCGAAGGCGGGACAGTTCTTCTGCGCCCGCGTCGAGGGTCACGAGCTGGTGCGCGAAACCGGGTGGGTCTATGCGCGCGCCAACCGGACGCCGCGGATGATCCACGAGCTGCTCACGGCTTTCGACGAGATCCGGGCGCGCCTGCTACTGGCGCCGCGGTGGACTGGCGGGAAGTAG
PROTEIN sequence
Length: 307
VDLRQLEILQAIAETGSFTACGKKLHVSQSAISRQVLLLEEELGEPLFLRVGRKVRMTPAAESLVQLGQRVFQDVRDTVGAITDRTRTLRGTLRLSGGMTVCLYVFPPLLKHLKRVHPQLDVRLTVATAERSVLEIRAGRVDIGLLTLPINESDLVAVPVMREELLVVMPPGHPLARRRRVAPRDLAGQPFILFEVGSATRRVIDHFFTAENITPTIVMDTENVEIIKAMVKTGLGIGIVPYQAIAREAKAGQFFCARVEGHELVRETGWVYARANRTPRMIHELLTAFDEIRARLLLAPRWTGGK*