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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_147318_5

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(3494..4102)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 401
  • Evalue 9.20e-109
ECF subfamily RNA polymerase sigma-24 subunit id=4398657 bin=GWF2_Bacteroidetes_29_10 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 203.0
  • Bit_score: 258
  • Evalue 6.90e-66
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 199.0
  • Bit_score: 240
  • Evalue 3.20e-61

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGAATTAAACTCAAACTTATCGCCAAAAGCAAAAATAGATTTTGAATTGGTATGTAAAGCTAGAGACGAGAATAATGAGAAAGCTTATGCCACTTTATTGGCTAAGTATAAAGATTCTATTTATTTTATGATGCTTAAAATGGTTAAAAATGCTGATGATGCTGATGATTTAACCATAGAGGCATTTGGTAAAGCATTCAATAGAATTCATCAATACACACCCGATTTTGCTTTTAGTACGTGGTTGTTTAGAATAGCCACCAACAATTGTATCGATTTTATCAGAAAGAAAAAAATGATTACTCTTTCCATCGATAAAACAGCTGATGATGGGGAAGGTGGAGAATTGAGTTTCGAAATAAAATCGCCCAATTTGGACCCTGAAGAACGCATCATTAGAAAACAAAAAATTAGAATAATGCGCGAAATCGTAGAAAAATTAAAACCTCGTTATCGGGAGTTAGTTGTTTTGCGTTATTTTAGAGAATTGTCGTATGAAGAAATTGCTGAGGAAATTCAACTGCCTTTAGGAACAGTAAAAGCACAGTTGTTTAGAGCGAGAGAGAAACTTTATCTGTTGATGCAAAATAAAAAAGGGAATATTTAA
PROTEIN sequence
Length: 203
MELNSNLSPKAKIDFELVCKARDENNEKAYATLLAKYKDSIYFMMLKMVKNADDADDLTIEAFGKAFNRIHQYTPDFAFSTWLFRIATNNCIDFIRKKKMITLSIDKTADDGEGGELSFEIKSPNLDPEERIIRKQKIRIMREIVEKLKPRYRELVVLRYFRELSYEEIAEEIQLPLGTVKAQLFRAREKLYLLMQNKKGNI*