ggKbase home page

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_780836_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 358..1221

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 553
  • Evalue 2.10e-154
RNA polymerase sigma factor rpoD id=3990799 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 288.0
  • Bit_score: 474
  • Evalue 6.60e-131
RNA polymerase, sigma 70 subunit, RpoD subfamily similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 287.0
  • Bit_score: 470
  • Evalue 4.60e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGACAACTAAAAATCACAAAGTCGATTACCAACCGCGAGAGCGCATCATTAGACAAGTATTTGCAGGAAATTGGTAAAGAAGAGCTTATTACAGCTGAAAAAGAAGTAGAATTAGCCAAGAAAATTAAAATGGGTGATCAACAAGCATTAGAAAAGCTTACGCGATCAAATTTACGATTTGTAGTATCAGTTGCCAAACAGTATCAAAACCAAGGACTAACACTTCCGGATCTTATTAACGAAGGAAATTTAGGATTAATTAAGGCCGCTCAAAGATTTGACGAAACAAGAGGTTTTAAATTTATTTCATACGCTGTATGGTGGATTCGTCAATCTATTTTACAAGCTTTAGCCGAACAATCAAGAATAGTACGTTTACCATTAAATCAAGTAGGTTCTTTAAACAAAATTAACAAAGCATTCTCTAAACTAGAACAAGAATTTGAACGCGAACCTTCACCTGAAGAATTAGCAAAAGTACTTGATTTACCTGAAGATAAAGTTGCAGACACTATAAGAGTTTCCGGTCGTCACATCTCTGTTGATGCACCTTTTCAAGAAGGAGAAGATAATAGCTTACTTGATGTATTAGAAAATAAAGATTCTCCAAGAGCTGACAAAGATCTTATGTCTGAATCATTACAAAAAGAAATTGAAAGATCTCTTTCAACTCTTACTGAAAGAGAACGAGATGTAATCAAACTTTTCTTTGGTATTGGCGGAACGCATGGAATGACTCTTGAAGAAATTGGGGCTAAATTTGACTTAACAAGAGAAAGAGTTAGACAGATTAAAGAAAAGGCAATAAAACGCCTAAGACATAATTCAAGAAGTAAACTACTCAAACCTTATTTAGGTTAA
PROTEIN sequence
Length: 288
MRQLKITKSITNRESASLDKYLQEIGKEELITAEKEVELAKKIKMGDQQALEKLTRSNLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNQVGSLNKINKAFSKLEQEFEREPSPEELAKVLDLPEDKVADTIRVSGRHISVDAPFQEGEDNSLLDVLENKDSPRADKDLMSESLQKEIERSLSTLTERERDVIKLFFGIGGTHGMTLEEIGAKFDLTRERVRQIKEKAIKRLRHNSRSKLLKPYLG*