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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_53730_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 1087..1956

Top 3 Functional Annotations

Value Algorithm Source
RpoD n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZP06_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 289.0
  • Bit_score: 401
  • Evalue 5.50e-109
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 555
  • Evalue 3.20e-155
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 289.0
  • Bit_score: 398
  • Evalue 1.30e-108

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGAGACAACTCAAAATTACCAAACAGGTTACTAATCGAGAAACAGTTTCGTTAGACAAATACTTACAAGACATTTCTAAAATAGGTTTAGTTTCTGCTGAAGAAGAAGCAGAATTAGCTAAATTAATTAGACAAGGTGACAAAAATGCACTAGAGAAATTAACAAAATCAAATTTAAGGTTTGTGGTTTCTGTTGCCAAACAATATCAAAATCAAGGTTTAAATTTATCCGACCTTATTAATGAAGGAAATATAGGATTAATAAAAGCAGCGGAAAGATTTGATGAAACTCGAGGATTTAAATTTATTTCGTATGCTGTTTGGTGGATTAGACAAAGTATTATGCAAGCAATTGCAGAACAAGCTCGTATTGTTCGATTGCCACTAAATAAAATAGGTAACATTACTAAAATAAATAGAACATTTTCACAATTAGAGCAAATATACGAAAGAGAGCCTTCTGTTGATGAAGTTGCTGAATTGTTAGAGATAACTGCAGCAGAAGTTAAAGACTCTTTATCCATTTCAGGAAGGCATATTTCTGTTGATGCTCCACTTTCAAATGAAGAAGAGAGCAATACCATATTAGATATTTTGATTGAGAAAGAAGGAATGTTAAATCCTGACAAAGAGCTAATGACACAATCTTTAAGAAACGAAATAGAAAGATCTTTTACTACATTATCCTATAGAGAAGCCGAAGTATTACGACTATATTATGGCATTAATTGCAAAACTTCCCAAACACTTGAAGAAATTGGTGAGCAATTTGAATTAACTAGAGAACGGGTTCGACAAATAAAGGAAAAAGCATTAAGAAAATTAAAACACACTTCACGATGTAGGTTATTAAAATGTTACTTAGGATAA
PROTEIN sequence
Length: 290
MRQLKITKQVTNRETVSLDKYLQDISKIGLVSAEEEAELAKLIRQGDKNALEKLTKSNLRFVVSVAKQYQNQGLNLSDLINEGNIGLIKAAERFDETRGFKFISYAVWWIRQSIMQAIAEQARIVRLPLNKIGNITKINRTFSQLEQIYEREPSVDEVAELLEITAAEVKDSLSISGRHISVDAPLSNEEESNTILDILIEKEGMLNPDKELMTQSLRNEIERSFTTLSYREAEVLRLYYGINCKTSQTLEEIGEQFELTRERVRQIKEKALRKLKHTSRCRLLKCYLG*