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This organism can only be binned in the context of its binning project CG1_02_FULL_binning. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_44316_1

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(2..313)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 221
  • Evalue 6.70e-55
DNA topoisomerase (EC:5.99.1.3) similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 91.0
  • Bit_score: 161
  • Evalue 1.30e-37
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00034A27B9 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 175
  • Evalue 2.30e-41

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 312
ATGGCAGAAAACGACGACAACATAGAACACGACGAAGAGTTTGAAGGTAACGAAGGCGAACACCTAGAAAATGTTATTCAGGTTTCGGGCATGTACCACGAATGGTTCTTGGATTATGCCTCTTATGTAATACTAGAACGTGCCGTACCTCATTTAAACGATGGTTTAAAACCTGTTCAACGACGAATTTTACATTCGATGAAAGAATTGGACGATGGTCGTTACCATAAAGTAGCTAACTTGATTGGAAACACCATGAAATATCACCCTCATGGTGATGCTTCTATTGGCGATGCCATGGTACAAATCGGA
PROTEIN sequence
Length: 104
MAENDDNIEHDEEFEGNEGEHLENVIQVSGMYHEWFLDYASYVILERAVPHLNDGLKPVQRRILHSMKELDDGRYHKVANLIGNTMKYHPHGDASIGDAMVQIG