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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_43403_1

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(502..807)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 201
  • Evalue 4.10e-49
Ribosomal subunit interface protein id=1767003 bin=GWE2_Bacteroidetes_42_42 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 99.0
  • Bit_score: 126
  • Evalue 1.60e-26
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 99.0
  • Bit_score: 121
  • Evalue 1.10e-25

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAAGTAAATTTAAAAATTAGTTCCGTGCATTTTGATGCAGATAAAAAATTAATTGAATTTATACACGAAAAAGTAGATAAACTAGCCAATTATTATGATAAAATAATAGATGGGGAGGTCATCTTAAAAATAGAAAATTCTCGTACTAGTGACAATAAGGTTGCTGAAATAAAATTATTAATACCTGGAAATGATATGTTTGCTAAAAAACATTGCAAAACATTTGAAGAAGCAACCGATACTGCTGTTGATGCACTAAGAATACAATTAAAAAAGCATAAAGAAAAAATGAGGAAAATATAA
PROTEIN sequence
Length: 102
MKVNLKISSVHFDADKKLIEFIHEKVDKLANYYDKIIDGEVILKIENSRTSDNKVAEIKLLIPGNDMFAKKHCKTFEEATDTAVDALRIQLKKHKEKMRKI*