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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_49614_2

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: 945..1523

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 389
  • Evalue 2.60e-105
sigma-70 family RNA polymerase sigma factor id=4204415 bin=GWF2_Bacteroidetes_38_335 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 191.0
  • Bit_score: 204
  • Evalue 8.60e-50
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 191.0
  • Bit_score: 186
  • Evalue 8.90e-45

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGCGATTATTTAAGGCAAAAAATATAAAATCATTTACGGATGACGAACTGATTACCCAGTACAAAAAAAATGGTGATGGTTTGTTGGTGGGAGAACTGTACAAAAGATATTCTCACCTCGTTTATGGAGTGTGCCTTAAATATTTAAAAAATCAAGATGAAAGTAAAGACGCAGCCATACAAATTTTTGAAAACTTATTAGTCGATTTGAAAAAACATGAAATAACCAATTTTAAATCGTGGCTTCATAGCGTTAGCAGAAATCATTGTTTAATGTTTTTAAGAAAAGAGCAAACCAAATTGAAAAAAGTTAATGAGTACGAAGCGGTTTACCAACATGAAGAAACTTTTGATGCTCCATTTGCAGTGCATGAAGCAGAAGAAAAAGAAGTGATGCTGACCAAATTAGAATATGCATTAACAACATTAAAAGGAGAACAACGAATTTGTGTCGAACTCTTTTTTATCAAAGAAAAATGTTACAATGAAGTAGCAGAAATAACAGGTTACGATATAAAAAAAGTAAAAAGTTACATACAAAATGGAAAAAGAAATTTAGCTAACATCATGTTAGGATAA
PROTEIN sequence
Length: 193
MRLFKAKNIKSFTDDELITQYKKNGDGLLVGELYKRYSHLVYGVCLKYLKNQDESKDAAIQIFENLLVDLKKHEITNFKSWLHSVSRNHCLMFLRKEQTKLKKVNEYEAVYQHEETFDAPFAVHEAEEKEVMLTKLEYALTTLKGEQRICVELFFIKEKCYNEVAEITGYDIKKVKSYIQNGKRNLANIMLG*