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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_8042_1

Organism: Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_31_6

near complete RP 44 / 55 MC: 3 BSCG 43 / 51 MC: 5 ASCG 9 / 38 MC: 3
Location: comp(2..226)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KR04_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 75.0
  • Bit_score: 88
  • Evalue 2.70e-15
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 75.0
  • Bit_score: 155
  • Evalue 2.50e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 75.0
  • Bit_score: 88
  • Evalue 7.50e-16

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 225
ATGTCGTCTCTCCAAAAGGGAGACGAATCGGCATTTAATGAATTGTATGCTCGTTACAGTAATCGAATCTCGTATTACATGTACAAAATGTTACGTCAGGACGAAGCAAAAGCTCAGGATTTCACGCAAGATGTTTTCCTAAAAGTTGTCGAATCTGCTGATAAATTTGATACCTCCAAAAATTTTAAAACATGGATTTTTACCATTGCAGCAAATCATTGTAAA
PROTEIN sequence
Length: 75
MSSLQKGDESAFNELYARYSNRISYYMYKMLRQDEAKAQDFTQDVFLKVVESADKFDTSKNFKTWIFTIAANHCK