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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_226_10

Organism: Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40

near complete RP 46 / 55 MC: 1 BSCG 45 / 51 ASCG 13 / 38
Location: 9980..10621

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-28 subunit FliA/WhiG id=12553402 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 214.0
  • Bit_score: 415
  • Evalue 2.70e-113
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 415
  • Evalue 3.80e-113
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 213.0
  • Bit_score: 347
  • Evalue 2.00e-93

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGATCGCCAAGTTGCCGGCGAATGTGGAGCTGGACGACCTGATCCAGGTCGGAATGATCGGGCTGACCGACGCGCTCACCCGCTACGAAGTGACCCAGGGCGTGCAATTCGAGACCTTTGCCACCCAACGCATTCGCGGCGCGATGCTTGACGAGTTGCGCGACACCGACTGGATGTCCCGCAGCTCGCGCAAAAGCCAGAAAGACATCGAGAAAGCCGTGCAGCGCCTGGAACAAAAACTGGGACGCAGCCCCCTCGAATCAGAGATTGCCATGGAACTCGACATGACATTGCCCGACTACCAGAGTCTGCTTGGAAAAGTGCGGGGCACCCAGCTGGTCTATCTGGAAGACATGTCGCGCGGAGCGGGTGATGACGATGAAGGTTTTCTAGAGCGCCACGAGGTGGCCGATGGTGAGACCGATCCGATGGCCCTGTTGCGCGACCAGCGCCTGCGAACATCCCTGGTCAGCGCCATCCAGTCGCTACCCGAACGCGAGCAGTACATCATGGGCATGTACTACGAGCACGACATGAATCTCAAGGAAATTGCGGCAGTCCTCGGCGTGACCGAATCGCGGGTCTGCCAATTACACAGCCAGTCCATCGCGCGGTTGCGCGCCAAAATGCGCAGCCACTGA
PROTEIN sequence
Length: 214
MIAKLPANVELDDLIQVGMIGLTDALTRYEVTQGVQFETFATQRIRGAMLDELRDTDWMSRSSRKSQKDIEKAVQRLEQKLGRSPLESEIAMELDMTLPDYQSLLGKVRGTQLVYLEDMSRGAGDDDEGFLERHEVADGETDPMALLRDQRLRTSLVSAIQSLPEREQYIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRSH*