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gwa1_scaffold_379_23

Organism: GWA1_OD1_40_21

near complete RP 41 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(23578..24771)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR54066.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 397.0
  • Bit_score: 774
  • Evalue 1.00e-220
RNA polymerase, sigma 70 subunit, rpod subfamily KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 397.0
  • Bit_score: 359
  • Evalue 1.60e-96
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 362
  • Evalue 1.00e+00

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Taxonomy

GWA1_OD1_40_21 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGAAAAAGAAAATTCAAAAAAAAGTTTTAAAGAAAAAAGGGGGAGCAAAGAAAGCTCCAAGAAAAGCGATTATAAAAGTAAAAAAACAAAAATTAGACCCGAAAATAGCCAAGAAAGTGAAGGACTTTAAAGCAAGAACCGATCGTCTCCTTGCTAAAGGAAAGGAGCGCGGTTTTGTCACATACGACGAGATATTGAAAGAATTTCCGCACATTGAAGAAGATATAGTATTTTTAGATGACCTCTATAGCCGACTTTCTGTCTCTGGAGTGGACATTCTTGAAGGAGGGGGAATATTAAGCATTGACCAGGAAGAGGTTTCCTCCAAGAAAAATGTTTATGGCGGCAAAAGCGATTCCTCTCACGATTCAATCCAGATGTATCTCAAGGAGATCGGGCAATACGCGCTGGTTTCGGCAAATATGGAAAAAGAGCTGGCAAGAAGAATAGAGCAGGGCGATGAAGAAGCGAAAAATCTTCTTGCCCGGGCGAACTTGCGCCTTGTGGTGTCAATCGCCAAAAAATATGTTGGCAGAAGCGCTGATCTTACCCTTCTTGACCTTATTCAAGAAGGAAACCTCGGATTATTTAGGGCGGTTGATAAATTTGATTGGACCAAAGGTTATAAATTTTCCACTTACGCCACATGGTGGATCAGGCAAGCGATAACGAGAGCGTTAGCTGATCAGTCTAGAACTATCAGAGTGCCGGTGCATATGGTTGAAACCATCGCCAAATACAAACAAGTTGTTCGCAGACTCTCTCAAGATCTCGGGCGTGAACCTATGCCGGAGGAAATTGCCACAGAGATGGGGTTGGAAGTTGAAAAAATTTATAATATTGAAAAAATTGACCAGGATACTGTGTCTTTGGAAAGCCCTGTCGGCGATGAAGGCGATGACGGTAAATCAACTCTGGGCGATTTCATAGCCGACGACAAAATTCTTTCTCCCGATCAGGATTCTTCAAGGAGAATTTTGTCCGACCAAGTCAAAGAAATACTCGGCGACCTTTCTCCCAAAGAGAAAAAAATCCTTGAAATGAGGCACGGTTTAGGTGACGGAATAACCCATACGCTTGAAGAAGTCGGCAGGGAATTCGGCGTCACCAGAGAGCGCATCAGACAAATTGAAGCAAAAGCCCACGAAAAAATAAGAATCCACGAAAAGATAAACCGATTGAGGAATTATTAG
PROTEIN sequence
Length: 398
MKKKIQKKVLKKKGGAKKAPRKAIIKVKKQKLDPKIAKKVKDFKARTDRLLAKGKERGFVTYDEILKEFPHIEEDIVFLDDLYSRLSVSGVDILEGGGILSIDQEEVSSKKNVYGGKSDSSHDSIQMYLKEIGQYALVSANMEKELARRIEQGDEEAKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNLGLFRAVDKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLSQDLGREPMPEEIATEMGLEVEKIYNIEKIDQDTVSLESPVGDEGDDGKSTLGDFIADDKILSPDQDSSRRILSDQVKEILGDLSPKEKKILEMRHGLGDGITHTLEEVGREFGVTRERIRQIEAKAHEKIRIHEKINRLRNY*