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RBG_16_scaffold_97369_curated_4

Organism: Deltaproteobacteria bacterium RBG_16_42_7

partial RP 31 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 4 / 38 MC: 1
Location: 2883..4271

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74BZ1_GEOSL similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 479.0
  • Bit_score: 429
  • Evalue 3.90e-117
  • rbh
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 479.0
  • Bit_score: 429
  • Evalue 1.20e-117
  • rbh
Tax=RBG_16_Deltaproteobacteria_42_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 463.0
  • Bit_score: 854
  • Evalue 6.90e-245

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Taxonomy

RBG_16_Deltaproteobacteria_42_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGTCGCCACAGCTGCAGCTAGCCATAAAACTTTTACAGCTTTCAAGGTTGGAGCTTGTAGAAATGGTGAGAGAAGAGATGGAAGCCAATCCAGTGTTGGAAGAAGATGGCAGTTCAGATGATGCAAATACAGTTTCTTCCGAAAAAGTTGCCCAACAAGATGAAAGAAAGGAGGTAGATTGGGAGGCATATTTAGAAAATTGTTATGAGAGGCCTTTAGGCGTTAATTTTTCAGAGGAGTCAGAAGAGTCGTCACTTGAGGCCACCCTCACAAGAAAGCCAACGTTAACTGAGCACCTGATGTGGCAGCTTCATCTTTCTCCGTTTACGGAAGAAGAAGCTCAGGTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGACGGTTACTTGAGAGTTGGTGAGGATAATGGAGACGAAGCAGTTTACTTAAAGTCTACAACACAGGAAATAGCAAAGGCAACCGGCGTGAGCGAAGATGTGGTTGAAGGTGTTATGAAGAAGATTCAGCAGTTCGATCCGGTAGGTGTAGGCTCAAGAAGCTTGAAAGAGTGTCTTTTAATGCAGGCTGAATTTCTTGAATGCAAGACGCAGCTTGTTGAAGAAATAATCAGCCATCATCTTCATAATCTTGAAAAGAGAAATTATAAGGCAATAGCCGCTGCTTTAAAGATTCCnnnnnnnnnnnnnnnnnnnnnnnnnAAGATTATCATGGGGTTGTCTCCTCGTCCTGGCAGTGCCTATGGCCAATCCGAAGCCAATGTTGTAATCCCAGATATATACATACAGAAAATTGGTGGAGATTATGTGATACTGCTTAACGAGAATGGTCTTCCCAAACTAAAGATAAGCTCTTATTATAAGACATTGCTTTCTAAAGACTGCGGAGGGACAGGTGCAACAAAGGCATATGTGCAGGAGCGGCTCCGTTCAGCCAGGTGGTTGATTCAAAGCATTCACCAGAGGCAGCGCACTGTATATAAGGTTGCTCAGAGCATCGTAAAATTTCAGAGAGAATTTTTTGACAATnnnnnnnnnnTTTTGAAGCCCCTTATCTTGAGAGATGTAGCTGCAGATATAAGTATGCATGAATCTACTATAAGCAGAGTTACTTCAAATAAATATGCGCATACGCCGCACGGCATCTTTGAATTAAAATATTTTTTCAGCCCTAAGATACATACAACTGATAGTGCAGACATGTCATCTAAAAGTGTTATGGAAAAGATTAAGGGTATATATGCCGCGGAAGACGCAACCAAACCATTGAGTGACCAAAAGATATTCGAAGTACTAAGAAGCTCTGGTATAGATATCGCAAGGCGAACAATAGCAAAATATAGAGAAGCTATGGGAATACTGCCAGCAAGCAAGAGGAAGAGGTTGTTTTAG
PROTEIN sequence
Length: 463
MSPQLQLAIKLLQLSRLELVEMVREEMEANPVLEEDGSSDDANTVSSEKVAQQDERKEVDWEAYLENCYERPLGVNFSEESEESSLEATLTRKPTLTEHLMWQLHLSPFTEEEAQXXXXXXXXXXXDGYLRVGEDNGDEAVYLKSTTQEIAKATGVSEDVVEGVMKKIQQFDPVGVGSRSLKECLLMQAEFLECKTQLVEEIISHHLHNLEKRNYKAIAAALKIXXXXXXXXXKIIMGLSPRPGSAYGQSEANVVIPDIYIQKIGGDYVILLNENGLPKLKISSYYKTLLSKDCGGTGATKAYVQERLRSARWLIQSIHQRQRTVYKVAQSIVKFQREFFDNXXXXLKPLILRDVAADISMHESTISRVTSNKYAHTPHGIFELKYFFSPKIHTTDSADMSSKSVMEKIKGIYAAEDATKPLSDQKIFEVLRSSGIDIARRTIAKYREAMGILPASKRKRLF*