ggKbase home page

Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

RIFOXYB2_FULL_RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated_61_1

Consensus taxonomy: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 944 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifoxyb2_full_scaffold_19588_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3326 bp 60.40 1.00 84.25
rifoxyb2_full_scaffold_55006_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2652 bp 57.65 1.00 64.93
rifoxyb2_full_scaffold_28302_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2521 bp 60.45 1.00 62.59
rifoxyb2_full_scaffold_17663_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2845 bp 63.27 1.00 59.58
rifoxyb2_full_scaffold_16413_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4064 bp 59.82 1.00 67.91
rifoxyb2_full_scaffold_9162_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 6654 bp 54.97 1.00 71.60
rifoxyb2_full_scaffold_13692_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3777 bp 60.02 1.00 84.35
rifoxyb2_full_scaffold_28159_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2019 bp 49.58 1.00 37.30
rifoxyb2_full_scaffold_26555_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2051 bp 60.90 1.00 78.25
rifoxyb2_full_scaffold_51775_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 3359 bp 57.31 1.00 63.41
rifoxyb2_full_scaffold_42098_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2971 bp 52.07 1.00 48.97
rifoxyb2_full_scaffold_8017_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4643 bp 67.26 1.00 81.03
rifoxyb2_full_scaffold_44515_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2692 bp 63.82 1.00 76.34
rifoxyb2_full_scaffold_58484_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2110 bp 58.91 1.00 77.63
rifoxyb2_full_scaffold_28714_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (60%)
5 2030 bp 38.42 1.00 33.99
rifoxyb2_full_scaffold_17095_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4451 bp 48.80 1.00 32.82
rifoxyb2_full_scaffold_20130_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 4540 bp 61.26 1.00 79.82
rifoxyb2_full_scaffold_14106_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3105 bp 63.16 1.00 82.61
rifoxyb2_full_scaffold_9768_curated
Class: Deltaproteobacteria (80%)
5 3984 bp 58.43 1.00 48.27
rifoxyb2_full_scaffold_12692_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 5177 bp 61.66 1.00 77.25
rifoxyb2_full_scaffold_16222_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2966 bp 62.91 1.00 86.18
rifoxyb2_full_scaffold_14075_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 3274 bp 61.70 1.00 74.22
rifoxyb2_full_scaffold_25377_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3587 bp 61.89 1.00 40.14
rifoxyb2_full_scaffold_11013_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3771 bp 65.42 1.00 86.63
rifoxyb2_full_scaffold_12926_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 3431 bp 64.97 1.00 80.53
rifoxyb2_full_scaffold_15274_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3765 bp 57.64 1.00 75.86
rifoxyb2_full_scaffold_45505_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4193 bp 66.06 1.00 74.62
rifoxyb2_full_scaffold_14299_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 4054 bp 63.12 1.00 64.90
rifoxyb2_full_scaffold_17822_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2787 bp 59.31 1.00 80.30
rifoxyb2_full_scaffold_30800_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3025 bp 59.34 1.00 82.71
rifoxyb2_full_scaffold_46861_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 1661 bp 59.78 1.00 65.20
rifoxyb2_full_scaffold_65360_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 1757 bp 56.97 1.00 68.81
rifoxyb2_full_scaffold_7897_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4139 bp 63.93 1.00 92.49
rifoxyb2_full_scaffold_20023_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (60%)
5 2575 bp 64.62 1.00 85.51
rifoxyb2_full_scaffold_30709_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 1937 bp 62.42 1.00 50.18
rifoxyb2_full_scaffold_17431_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (60%)
5 2481 bp 60.98 1.00 76.18
rifoxyb2_full_scaffold_11676_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3575 bp 60.84 1.00 77.12
rifoxyb2_full_scaffold_22607_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2441 bp 63.99 1.00 80.25
rifoxyb2_full_scaffold_35387_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 1497 bp 57.05 1.00 74.35
rifoxyb2_full_scaffold_17157_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3513 bp 50.73 1.00 40.56
rifoxyb2_full_scaffold_8992_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 4081 bp 64.27 1.00 82.85
rifoxyb2_full_scaffold_22848_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (60%)
5 3940 bp 63.91 1.00 85.58
rifoxyb2_full_scaffold_62099_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2375 bp 65.85 1.00 71.75
rifoxyb2_full_scaffold_14829_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2964 bp 67.07 1.00 47.98
rifoxyb2_full_scaffold_8611_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 4448 bp 55.94 1.00 65.29
rifoxyb2_full_scaffold_6478_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 6690 bp 63.54 1.00 83.90
rifoxyb2_full_scaffold_22380_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2421 bp 64.44 1.00 87.48
rifoxyb2_full_scaffold_43375_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2822 bp 63.32 1.00 38.70
rifoxyb2_full_scaffold_18915_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3822 bp 49.32 1.00 47.96
rifoxyb2_full_scaffold_61592_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 1619 bp 60.16 1.00 68.56
Displaying items 151-200 of 944 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.