ggKbase home page

Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

RIFOXYB2_FULL_RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated_61_1

Consensus taxonomy: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 751-800 of 944 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifoxyb2_full_scaffold_12849_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 3366 bp 65.75 1.00 79.41
rifoxyb2_full_scaffold_17431_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (60%)
5 2481 bp 60.98 1.00 76.18
rifoxyb2_full_scaffold_84530_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 652 bp 63.96 1.00 99.85
rifoxyb2_full_scaffold_40610_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1544 bp 64.44 1.00 89.38
rifoxyb2_full_scaffold_58711_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 706 bp 68.98 1.00 76.91
rifoxyb2_full_scaffold_11676_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3575 bp 60.84 1.00 77.12
rifoxyb2_full_scaffold_88593_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1045 bp 61.44 1.00 99.62
rifoxyb2_full_scaffold_15722_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 2850 bp 61.16 1.00 81.37
rifoxyb2_full_scaffold_114518_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 1331 bp 49.44 1.00 37.42
rifoxyb2_full_scaffold_77339_curated
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
4 2017 bp 54.64 1.00 74.22
rifoxyb2_full_scaffold_121304_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1073 bp 65.33 1.00 99.25
rifoxyb2_full_scaffold_18089_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 2710 bp 68.56 1.00 96.09
rifoxyb2_full_scaffold_17532_curated
Species: GWA2_Deltaproteobacteria_65_63_curated (50%)
2 2857 bp 65.03 1.00 92.30
rifoxyb2_full_scaffold_15684_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 2650 bp 68.57 1.00 96.23
rifoxyb2_full_scaffold_58479_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1041 bp 64.55 1.00 99.71
rifoxyb2_full_scaffold_57779_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1267 bp 67.56 1.00 99.21
rifoxyb2_full_scaffold_84490_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1005 bp 67.36 1.00 99.70
rifoxyb2_full_scaffold_42558_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1604 bp 68.08 1.00 78.74
rifoxyb2_full_scaffold_92618_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1566 bp 64.62 1.00 99.81
rifoxyb2_full_scaffold_40308_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1254 bp 57.58 1.00 95.93
rifoxyb2_full_scaffold_22607_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 2441 bp 63.99 1.00 80.25
rifoxyb2_full_scaffold_55330_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1384 bp 71.17 1.00 99.28
rifoxyb2_full_scaffold_44063_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1623 bp 66.73 1.00 92.79
rifoxyb2_full_scaffold_30168_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 1742 bp 59.93 1.00 70.44
rifoxyb2_full_scaffold_30035_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 2055 bp 64.33 1.00 100.00
rifoxyb2_full_scaffold_89606_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 741 bp 65.32 1.00 100.00
rifoxyb2_full_scaffold_20636_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 2212 bp 60.49 1.00 72.56
rifoxyb2_full_scaffold_51455_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1176 bp 69.98 1.00 95.92
rifoxyb2_full_scaffold_67239_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 999 bp 58.86 1.00 60.66
rifoxyb2_full_scaffold_93799_curated
Species: RifOxyA12_full_Deltaproteobacteria_61_11_curated (100%)
1 879 bp 67.69 1.00 99.66
rifoxyb2_full_scaffold_24221_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 2343 bp 68.08 1.00 97.82
rifoxyb2_full_scaffold_10899_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
8 4938 bp 62.72 1.00 61.73
rifoxyb2_full_scaffold_24146_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
6 2292 bp 63.96 1.00 89.01
rifoxyb2_full_scaffold_21944_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1645 bp 36.23 1.00 14.41
rifoxyb2_full_scaffold_4507_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
7 6713 bp 61.06 1.00 69.72
rifoxyb2_full_scaffold_22341_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (75%)
4 3605 bp 52.12 1.00 54.09
rifoxyb2_full_scaffold_94782_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 956 bp 41.32 1.00 42.36
rifoxyb2_full_scaffold_19717_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 2657 bp 60.07 1.00 91.00
rifoxyb2_full_scaffold_35387_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 1497 bp 57.05 1.00 74.35
rifoxyb2_full_scaffold_17157_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
5 3513 bp 50.73 1.00 40.56
rifoxyb2_full_scaffold_60472_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1080 bp 64.17 1.00 99.72
rifoxyb2_full_scaffold_46859_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 3909 bp 63.24 1.00 71.60
rifoxyb2_full_scaffold_24228_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 3073 bp 46.44 1.00 45.98
rifoxyb2_full_scaffold_94799_curated
Species: RBG_16_Desulfobacca_60_12_curated (100%)
1 472 bp 62.29 1.00 99.79
rifoxyb2_full_scaffold_82017_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 1056 bp 65.72 1.00 84.38
rifoxyb2_full_scaffold_58990_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1025 bp 66.63 1.00 99.80
rifoxyb2_full_scaffold_33120_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1663 bp 67.71 1.00 79.37
rifoxyb2_full_scaffold_22345_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (75%)
4 1373 bp 46.03 1.00 60.52
rifoxyb2_full_scaffold_44308_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1449 bp 38.58 1.00 16.36
rifoxyb2_full_scaffold_72402_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 1978 bp 59.50 1.00 84.33
Displaying items 751-800 of 944 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.