ggKbase home page

Deltaproteobacteria bacterium RIFOXYB2_FULL_66_7

RIFOXYB2_FULL_RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated_61_1

Consensus taxonomy: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 944 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
rifoxyb2_full_scaffold_31229_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 1960 bp 69.29 1.00 100.10
rifoxyb2_full_scaffold_24396_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (85.71%)
7 2897 bp 60.17 1.00 61.72
rifoxyb2_full_scaffold_40279_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1256 bp 59.00 1.00 78.82
rifoxyb2_full_scaffold_12283_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 2980 bp 68.59 1.00 100.87
rifoxyb2_full_scaffold_27804_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (71.43%)
7 4561 bp 60.38 1.00 73.21
rifoxyb2_full_scaffold_52280_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1048 bp 65.55 1.00 99.90
rifoxyb2_full_scaffold_33636_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 2955 bp 70.29 1.00 100.10
rifoxyb2_full_scaffold_53188_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 1790 bp 71.40 1.00 93.85
rifoxyb2_full_scaffold_48884_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1469 bp 48.13 1.00 58.41
rifoxyb2_full_scaffold_4216_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
15 9164 bp 58.04 1.00 66.42
rifoxyb2_full_scaffold_150751_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 774 bp 46.90 1.00 63.57
rifoxyb2_full_scaffold_52444_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1360 bp 64.63 1.00 99.93
rifoxyb2_full_scaffold_29298_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 2087 bp 64.21 1.00 92.00
rifoxyb2_full_scaffold_41221_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
4 3097 bp 63.38 1.00 99.48
rifoxyb2_full_scaffold_30723_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 2026 bp 63.13 1.00 86.77
rifoxyb2_full_scaffold_85661_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 678 bp 45.43 1.00 19.03
rifoxyb2_full_scaffold_50931_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 1464 bp 62.57 1.00 82.58
rifoxyb2_full_scaffold_21180_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (85.71%)
7 3132 bp 55.24 1.00 45.69
rifoxyb2_full_scaffold_88377_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 1430 bp 55.31 1.00 52.87
rifoxyb2_full_scaffold_57238_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 2838 bp 62.86 1.00 75.79
rifoxyb2_full_scaffold_74329_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1145 bp 67.95 1.00 100.09
rifoxyb2_full_scaffold_14396_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 3229 bp 59.80 1.00 79.99
rifoxyb2_full_scaffold_24540_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 1990 bp 64.27 1.00 93.92
rifoxyb2_full_scaffold_25240_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 2164 bp 66.31 1.00 101.48
rifoxyb2_full_scaffold_68798_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1045 bp 64.59 1.00 99.90
rifoxyb2_full_scaffold_105193_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 912 bp 27.85 1.00 22.04
rifoxyb2_full_scaffold_17468_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 2712 bp 61.95 1.00 99.45
rifoxyb2_full_scaffold_157578_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1527 bp 56.25 1.00 39.88
rifoxyb2_full_scaffold_18040_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (83.33%)
6 2551 bp 62.84 1.00 79.26
rifoxyb2_full_scaffold_16001_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2925 bp 57.68 1.00 54.15
rifoxyb2_full_scaffold_6787_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
12 6020 bp 59.90 1.00 50.33
rifoxyb2_full_scaffold_24543_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (75%)
4 2804 bp 53.57 1.00 55.10
rifoxyb2_full_scaffold_56556_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 1120 bp 64.11 1.00 85.45
rifoxyb2_full_scaffold_29511_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
2 1581 bp 60.72 1.00 64.52
rifoxyb2_full_scaffold_53613_curated
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (100%)
3 2213 bp 60.91 1.00 81.61
rifoxyb2_full_scaffold_31830_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 3360 bp 55.80 1.00 27.86
rifoxyb2_full_scaffold_46779_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (80%)
5 2439 bp 65.40 1.00 86.35
rifoxyb2_full_scaffold_19063_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (50%)
2 2714 bp 64.63 1.00 83.90
rifoxyb2_full_scaffold_12443_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 3387 bp 56.98 1.00 65.28
rifoxyb2_full_scaffold_30927_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
3 1986 bp 62.34 1.00 82.02
rifoxyb2_full_scaffold_26943_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (71.43%)
7 1768 bp 58.60 1.00 63.12
rifoxyb2_full_scaffold_19262_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (75%)
4 2473 bp 64.90 1.00 78.61
rifoxyb2_full_scaffold_22412_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
4 2353 bp 56.69 1.00 62.98
rifoxyb2_full_scaffold_9865_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
6 3859 bp 64.63 1.00 77.66
rifoxyb2_full_scaffold_33037_curated
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (66.67%)
3 1938 bp 65.94 1.00 87.93
rifoxyb2_full_scaffold_22416_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (66.67%)
3 2255 bp 53.17 1.00 69.05
rifoxyb2_full_scaffold_20598_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (75%)
4 2381 bp 58.29 1.00 44.86
rifoxyb2_full_scaffold_33031_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 1777 bp 38.49 1.00 26.67
rifoxyb2_full_scaffold_10040_curated
Species: RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated (50%)
4 3823 bp 65.05 1.00 91.50
rifoxyb2_full_scaffold_67530_curated
Species: RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated (100%)
1 698 bp 69.34 1.00 99.71
Displaying items 101-150 of 944 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.