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gwa2_scaffold_2569_3

Organism: GW2011_AR6

partial RP 30 / 55 MC: 5 BSCG 17 / 51 ASCG 19 / 38 MC: 2
Location: comp(2480..3019)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTX7_9BACT similarity UNIREF
DB: UNIREF90
  • Identity: 34.0
  • Coverage: 0.0
  • Bit_score: 99
  • Evalue 1.00e+00
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR6 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 369
  • Evalue 2.60e-99
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 180.0
  • Bit_score: 94
  • Evalue 3.30e-17

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Taxonomy

AR6 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 540
ATGCAATCCCAATATTATTCTAACGGGAAACCAGCCTCGGCTCAACTTAATCTTGAGCGGTATCGAGATGGATTACTTAGATATCTGTCGAAGCTTACTGGGGACAGGGAGGATGCAGAAGACCTTACACAGGAAACCTTTCTTCGTGCCATCAAGAACGCACATACTTTAAGGGATGAGGGAAGCATTAAGCGCTGGCTTTATAGGATAGCCACTAATTTAAGCAACTCCAGGTGCAGAGACCGCGCTAAACATCCTTTAATTCTCTCTTGTGATCTAAATGGTTACGGGTATGGAGAGCTGGATAATGAGTATCCCGGTAATGGAGTGGATAACAGGGGGCATTTAGAGGAGAGAATCTGTGCAGAATCATACCTTCCTTTGATACCGGGCAAGTATAGTGCCCCCCTTAAATTAAACTCTCTTGGATTTTCATACGATGAGATAGCGGAAGAGCTCTCGATTCCTGTGGGGACTGTCAAGTCCAGGATATGGCGTGGCAGAAATCTCACTAACTCTTTGTTAAATGGCAGGTGTTAG
PROTEIN sequence
Length: 180
MQSQYYSNGKPASAQLNLERYRDGLLRYLSKLTGDREDAEDLTQETFLRAIKNAHTLRDEGSIKRWLYRIATNLSNSRCRDRAKHPLILSCDLNGYGYGELDNEYPGNGVDNRGHLEERICAESYLPLIPGKYSAPLKLNSLGFSYDEIAEELSIPVGTVKSRIWRGRNLTNSLLNGRC*