ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

gwa2_scaffold_343_13

Organism: GWA2_Berkelbacteria_35_9

near complete RP 41 / 55 BSCG 43 / 51 ASCG 12 / 38
Location: comp(12983..13669)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase Tax=GWA2_Berkelbacteria_35_9 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 465
  • Evalue 5.80e-128
pseudouridine synthase, RluA family KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 239.0
  • Bit_score: 138
  • Evalue 2.50e-30
Pseudouridine synthase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 136
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Berkelbacteria_35_9 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAATATTCAATTAAGTACGAAAATAATGATTTTTATATGGTTGATAAACACCCGAATGTTGAATCTTTTGAAATTGCCGATGAAATTAATAATAAAAATAATATCGAAAGAAATGGTTTAATCCATCGGCTAGATAAAGATACATCTGGATTAATGGTAATTGCTAAAAATAATTCTGCACTTATTACAATTCAAAAACTTTTTAAAGATAGAAAAGTTAACAAGTCGTATCTGGGTTTGGTCTGGGGAAAATTAGAAAATAGCGGTCAAGTTGAACTGAATATTTCCCGTGATCCGAAAAGAAAAAAACCAATGAAAATTACTCAATACTCAACGCAATTAAATAGGGGAGATCTAAGAAGTTCTAAAACAAGTTGGCGGGTAAAACATTATTATCAATATAAAAATAATTATTTCTCATTGGTTAAATTTTCAATTTTTAGTGGCAGAACACACCAAATTAGATTAACTGCTAATTATTTACACCATCCTATAATTGGGGATAAGATATACTTTTTTAAAGATTCGAAAAGAATGAGTGACGGTTTAAAATTGGAAAGACAATTTTTACATAGCTATAAAATTGGCTTTAAATATAAAAATAAATTGTTTAATTTTCAATCCGACCTTCCAGCCGATCTAAAAATAATTATTGATAAAATTGGTCCAGCTATTGAGAAATAA
PROTEIN sequence
Length: 229
MKYSIKYENNDFYMVDKHPNVESFEIADEINNKNNIERNGLIHRLDKDTSGLMVIAKNNSALITIQKLFKDRKVNKSYLGLVWGKLENSGQVELNISRDPKRKKPMKITQYSTQLNRGDLRSSKTSWRVKHYYQYKNNYFSLVKFSIFSGRTHQIRLTANYLHHPIIGDKIYFFKDSKRMSDGLKLERQFLHSYKIGFKYKNKLFNFQSDLPADLKIIIDKIGPAIEK*