ggKbase home page

ERMLT700_curated_scaffold_35

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_35_31
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

31680..31853
-----------------
DNA (174bp)
protein (58aa)
Flp/Fap pilin component id=1947712 bin=GWB2_Desulfobacterales_56_26 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_35_32
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

31914..32090
-----------------
DNA (177bp)
protein (59aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_33
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

32107..32583
-----------------
DNA (477bp)
protein (159aa)
peptidase A24 n=1 Tax=Nevskia ramosa RepID=UPI0003B4C116
putative prepilin type 4 peptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_34
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

32615..33466
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366EC41
flp pilus assembly protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ERMLT700_curated_scaffold_35_35
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

33472..34887
-----------------
DNA (1416bp)
protein (472aa)
Type II and III secretion system protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NX0_SOLUE
type II and III secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_36
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

34901..36082
-----------------
DNA (1182bp)
protein (394aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E9F14
Flp pilus assembly protein ATPase CpaE-like
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ERMLT700_curated_scaffold_35_37
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

36089..37411
-----------------
DNA (1323bp)
protein (441aa)
Type II secretion system protein E n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB9_SOLUE
type II secretion system protein E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_38
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

37411..38373
-----------------
DNA (963bp)
protein (321aa)
Type II secretion system F domain protein id=5007830 bin=GWA2_Deltaproteo_65_63 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
type II secretion system (T2SS), F family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_39
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

38375..39283
-----------------
DNA (909bp)
protein (303aa)
Tad secretion system, secretion accessory protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WB07_RALSL
tadC; Tad secretion system, secretion accessory protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_40
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

39280..40602
-----------------
DNA (1323bp)
protein (441aa)
AAA ATPase central domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6N2_CHLAD
ATPase AAA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_41
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

40599..40955
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036104B0
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_42
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

40962..42155
-----------------
DNA (1194bp)
protein (398aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_43
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

42317..43396
-----------------
DNA (1080bp)
protein (360aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQZ0_KORVE
cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_44
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(43464..45560)
-----------------
DNA (2097bp)
protein (699aa)
Fe-S protein n=1 Tax=uncultured Acidobacteria bacterium A12 RepID=F8TTL4_9BACT
radical SAM domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_45
unknown

Not on your lists

45642..45770
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

ERMLT700_curated_scaffold_35_46
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

45826..50550
-----------------
DNA (4725bp)
protein (1575aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM42_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_47
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

50543..51991
-----------------
DNA (1449bp)
protein (483aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) id=4115281 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_48
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(52149..55007)
-----------------
DNA (2859bp)
protein (953aa)
TonB-dependent receptor n=1 Tax=uncultured Acidobacteria bacterium A12 RepID=F8TTM0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_35_49
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

55189..56220
-----------------
DNA (1032bp)
protein (344aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NST2_GRAMM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_50
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(56242..56874)
-----------------
DNA (633bp)
protein (211aa)
Putative Peptidase S16, lon-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAN4_9BACT
putative peptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_35_51
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(56887..58227)
-----------------
DNA (1341bp)
protein (447aa)
von Willebrand factor, type A; K07114 uncharacterized protein id=12555464 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_35_52
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(58381..59901)
-----------------
DNA (1521bp)
protein (507aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=12555463 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
magnesium protoporphyrin chelatase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_35_53
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

60074..60889
-----------------
DNA (816bp)
protein (272aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] id=12555462 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycerophosphoryl diester phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_54
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

60969..61979
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000363B5DC
pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_55
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(62010..64295)
-----------------
DNA (2286bp)
protein (762aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NY6_SOLUE
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_35_56
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(64322..65041)
-----------------
DNA (720bp)
protein (240aa)
uracil-DNA glycosylase superfamily protein id=14631343 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
uracil-DNA glycosylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_35_57
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

65200..67896
-----------------
DNA (2697bp)
protein (899aa)
Pyruvate dehydrogenase E1 component n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV7_KORVE
aceE; pyruvate dehydrogenase subunit E1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_58
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

68027..69454
-----------------
DNA (1428bp)
protein (476aa)
branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.61)
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component-like enzyme n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JBP0_NITOC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_35_59
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

69454..70899
-----------------
DNA (1446bp)
protein (482aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=12555459 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydrolipoamide dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_35_60
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

71035..71901
-----------------
DNA (867bp)
protein (289aa)
Uncharacterized protein n=1 Tax=uncultured gamma proteobacterium RepID=R5A2Z8_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 31-60 of 63 in total

View Taxonomy