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ERMLT700_curated_scaffold_50

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_50_31
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

29334..30695
-----------------
DNA (1362bp)
protein (454aa)
sigma-54 dependent DNA-binding response regulator id=12556982 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_50_32
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(30706..31236)
-----------------
DNA (531bp)
protein (177aa)
Universal stress protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C8P0_9PLAN
universal stress protein UspA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_33
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31484..32458
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S137_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63084.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 /; VKM B-1734) (Halococcus turkmenicus).;"
ERMLT700_curated_scaffold_50_34
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

32505..32834
-----------------
DNA (330bp)
protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_35
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(32889..34091)
-----------------
DNA (1203bp)
protein (401aa)
hypothetical protein id=24485115 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_36
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(34088..35170)
-----------------
DNA (1083bp)
protein (361aa)
Cytochrome bc complex cytochrome b subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLL7_9BACT id=5225749 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
petB; cytochrome bc complex cytochrome b subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_37
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(35170..35607)
-----------------
DNA (438bp)
protein (146aa)
Plastoquinol--plastocyanin reductase (EC:1.10.9.1)
Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=uncultured Acidobacteria bacterium RepID=G8DPL3_9BACT id=5225750 bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_38
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

35808..36152
-----------------
DNA (345bp)
protein (115aa)
Peptidoglycan-binding LysM n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2C7_NITHN
peptidoglycan-binding LysM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_50_39
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

36191..37555
-----------------
DNA (1365bp)
protein (455aa)
Cytochrome c family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UD29_ANASK
cytochrome C family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_50_40
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

37772..38746
-----------------
DNA (975bp)
protein (325aa)
Putative deca-heme c-type cytochrome n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLL4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_50_41
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

38750..40894
-----------------
DNA (2145bp)
protein (715aa)
hypothetical protein id=14429164 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_50_42
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

40980..42356
-----------------
DNA (1377bp)
protein (459aa)
hypothetical protein id=12554705 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_43
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(42376..42876)
-----------------
DNA (501bp)
protein (167aa)
Universal stress protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY17_9BACT
UspA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_50_44
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(43204..43605)
-----------------
DNA (402bp)
protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_50_45
unknown

Not on your lists

43958..44152
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

ERMLT700_curated_scaffold_50_46
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

44134..44541
-----------------
DNA (408bp)
protein (136aa)
tRNA modification GTPase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CKF1_ROBBH
tRNA modification GTPase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
ERMLT700_curated_scaffold_50_47
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

44591..45976
-----------------
DNA (1386bp)
protein (462aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZSV1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON77103.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
ERMLT700_curated_scaffold_50_48
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46020..46640
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036D9FCE
cyclase/dehydrase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMLT700_curated_scaffold_50_49
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(46758..47414)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89342.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_50_50
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(47442..48350)
-----------------
DNA (909bp)
protein (303aa)
Cytochrome c class I n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EM70_9CHLR
Cytochrome c class I {ECO:0000313|EMBL:CCF85783.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
cytochrome C
ERMLT700_curated_scaffold_50_51
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

48473..49009
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein id=12554332 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ERMLT700_curated_scaffold_50_52
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

49017..49853
-----------------
DNA (837bp)
protein (279aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLI4_MOOTA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_50_53
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49850..50152
-----------------
DNA (303bp)
protein (101aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WL94_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW12476.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
ERMLT700_curated_scaffold_50_54
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(50158..50610)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein; K07112 id=12557253 bin=CNBR_ACIDO species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_50_55
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(50607..51122)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein; K07112 id=12557252 bin=CNBR_ACIDO species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_50_56
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

51216..51827
-----------------
DNA (612bp)
protein (204aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIF8_RHOM4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_50_57
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51878..52795
-----------------
DNA (918bp)
protein (306aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGQ3_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27899.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
ERMLT700_curated_scaffold_50_58
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

53166..53537
-----------------
DNA (372bp)
protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_50_59
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(53620..54045)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000363357E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMLT700_curated_scaffold_50_60
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54135..54728)
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZEX8_9BRAD
conserved exported hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM92309.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Displaying items 31-60 of 68 in total

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