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ERMLT700_curated_scaffold_67

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_67_31
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(33443..33934)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein id=12554080 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_32
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(33922..35334)
-----------------
DNA (1413bp)
protein (471aa)
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=12554079 bin=CNBR_ACIDO species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA-i(6)A37 thiotransferase enzyme MiaB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_33
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(35316..37001)
-----------------
DNA (1686bp)
protein (562aa)
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=12554078 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recN; DNA repair ATPase RecN
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_34
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

37111..37869
-----------------
DNA (759bp)
protein (253aa)
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ id=12554077 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein TolQ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_35
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

38023..38442
-----------------
DNA (420bp)
protein (140aa)
protein TolR; K03560 biopolymer transport protein TolR id=12554076 bin=CNBR_ACIDO species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_36
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

38439..39215
-----------------
DNA (777bp)
protein (259aa)
TonB family protein id=12554075 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_37
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

39228..40685
-----------------
DNA (1458bp)
protein (486aa)
beta-propeller repeat-containing to-pal system protein TolB; K03641 TolB protein id=12554074 bin=CNBR_ACIDO species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biopolymer transport periplasmic beta-propeller repeat protein, TolB-related
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_38
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

40673..41269
-----------------
DNA (597bp)
protein (199aa)
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein id=12554073 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
OmpA family outer membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_39
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

41317..42171
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein id=12554072 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TPR repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_40
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

42280..42735
-----------------
DNA (456bp)
protein (152aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=12554071 bin=CNBR_ACIDO species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ssb; single-strand binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_41
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(42808..43170)
-----------------
DNA (363bp)
protein (121aa)
cupin domain-containing protein id=12554070 bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cupin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_42
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(43167..44936)
-----------------
DNA (1770bp)
protein (590aa)
Phosphoenolpyruvate-protein phosphotransferase id=4541197 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphoenolpyruvate-protein phosphotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_43
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(44933..45232)
-----------------
DNA (300bp)
protein (100aa)
phosphocarrier protein HPr n=1 Tax=Thioalkalivibrio RepID=UPI00037CB6D8
phosphotransferase system HPr family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMLT700_curated_scaffold_67_44
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(45275..45691)
-----------------
DNA (417bp)
protein (139aa)
PTS system transporter subunit IIA (EC:2.7.1.69); K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69] id=12554067 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PTS system transporter subunit IIA (EC:2.7.1.69)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_45
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(45731..46669)
-----------------
DNA (939bp)
protein (313aa)
UPF0042 nucleotide-binding protein ACP_0619 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=Y619_ACIC5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_46
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(46666..47661)
-----------------
DNA (996bp)
protein (332aa)
HPr kinase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=12554065 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hprK; hpr(ser) kinase/phosphatase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_67_47
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(47763..48347)
-----------------
DNA (585bp)
protein (195aa)
Ribosomal subunit interface protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF6_CHLTF
ribosomal subunit interface protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_48
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(48449..49873)
-----------------
DNA (1425bp)
protein (475aa)
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma54 factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_49
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(49927..50691)
-----------------
DNA (765bp)
protein (255aa)
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=12554062 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_50
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(50664..52784)
-----------------
DNA (2121bp)
protein (707aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_51
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(53092..54810)
-----------------
DNA (1719bp)
protein (573aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=12554060 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_52
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(54892..55863)
-----------------
DNA (972bp)
protein (324aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] id=12554059 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-CoA carboxylase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_53
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(55980..59609)
-----------------
DNA (3630bp)
protein (1210aa)
DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=12554058 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaE3; DNA polymerase III subunit alpha (EC:2.7.7.7)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_54
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(59799..61436)
-----------------
DNA (1638bp)
protein (546aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=12554057 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
guaA; GMP synthase (EC:6.3.5.2)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_55
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

61569..62615
-----------------
DNA (1047bp)
protein (349aa)
Pyrrolo-quinoline quinone n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZC3_HALMD
pyrrolo-quinoline quinone
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_67_56
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(62692..63921)
-----------------
DNA (1230bp)
protein (410aa)
Multiple substrate aminotransferase n=1 Tax=uncultured bacterium RepID=F8UVV4_9BACT
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_57
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(63918..64934)
-----------------
DNA (1017bp)
protein (339aa)
id=12554055 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_58
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

65044..69039
-----------------
DNA (3996bp)
protein (1332aa)
histidine kinase (EC:2.7.13.3) id=12554054 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_67_59
unknown

Not on your lists

69420..70133
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

ERMLT700_curated_scaffold_67_60
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70204..71271
-----------------
DNA (1068bp)
protein (356aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036A02FF
Uncharacterized protein {ECO:0000313|EMBL:KFA89431.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
Displaying items 31-60 of 60 in total

View Taxonomy