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04302015_21_scaffold_4914_3

Organism: 04302015_21_Planctomycetia_64_5

partial RP 39 / 55 MC: 2 BSCG 39 / 51 MC: 3 ASCG 9 / 38
Location: 1779..3185

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SFA0_PLABD similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 482.0
  • Bit_score: 275
  • Evalue 1.30e-70
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 482.0
  • Bit_score: 275
  • Evalue 3.90e-71
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 482.0
  • Bit_score: 275
  • Evalue 1.80e-70

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Taxonomy

Rubinisphaera brasiliensis → Rubinisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1407
ATGACCAAGACAATGAAAACGAAACGCCGGCGCCGTTCGCCGGCGAAGCCGAAGGCCACGGGCGGCCTTTGTGCCGATCCGCTACGCGAGTATCTCAGCCAGCTCCGCTGCTGTCCGCTGCTGTCGGCCGAAGAAGAAGCCAAGATTGCCCGCGAGCTGCAACTTGCGCGGCGGCGGTTGCGACGCGTGCTTTTGAGCAATCACTACATGCTGCTCGGTGCCGTGGACGTGCTGCGCGACGTGCAGCGGGGCCGGCAGCGGGCAGACCGCGTGTTGGAAACCACGGTTTTCGACCGCTCGCAATATGGCGAAGTCACGGCCCGCATTCCGCAAGTCGTGTGGCGGCTGGAGCGACTGACGGCACGCAACCGGCGTGACGCCGCCCGGCTTGGCGGTCCGGCCAGTCCGGCCCTTCGCCGACCCTACGCGCGTCGGCTGAAAACCCGCTGTCGTGCGGCGGCGGAGCTGGTCTGGGACGCGAAGCTGCGGTTGAAAACCATTTATCCCCGCTGGCGGGAGCTGTGCGCCATCGCCGAACGCATGCAGTCTCTCGATCGGGCAGGTCGCCGCCCAGGCGGCGCTCACGTCGAGCAGCAAAGGGAGCTGGCCCGCTTGATTGAATTGACCGGCGTGCGGCCGCACGTCTTGGCCCGCTGGGTGACGTTGACCAAGGCTCTTTTGGCGCGTTACGAGGCGATCAAGCACCGCCTGACCCGCCACAACCTGAGATTGGTGGTGTCGATTGCCAAGCACTACGCCCGCAAGAATCCCGACCTTCTCGACCTGATCCAAGAAGGCAACACGGGGCTGCTCAAGGCGGCCGACAAGTTCCAACCGCTCGGATACCGTTTCTCGACCTACGCGACGTGGTGGATCAAGCAATCGATCACCAAGTCGCTGGTCGAGCACAACGGCATGATTGTCTTGCCGCGCGAGAAGCTGCGGTCGCTCGTTCGCTTTCAGAAATCGCGGCGGCAGTGGATTGAGCGGAACTGGCGCCACCCGACCGTGGAAGAAGAGATCGAAGCCTGCGGCTTGCCGGAGCGGGACGCCGCAACGCTGCTCTCGGTCGACCGGCCACTGTTATCGCTCGACACGGCCGGTCCCGACATCGAAGGCACGCTGGGCGAGTTGGTGGAGGACAAGCACCATGACGCGCCGATCGACGATCTGAACCGGCAAGCGCTGAAGGAGCTGGTCCACGAAGTGCTGGTCGGCCTGAAAGACCGCGAGCGGCAGGTGATCGAGCTGCGTTTTGGCCTGGCGGACCAGCAGTTCCGCACGCTCGACGAGGTGGGCGCGCTGCTGGGTGTCTCCGGCGAGCGCGTGCGGCAGATCGAGCGGCGCGCGGTCGAAAAGCTGCGCAGGTCGAAGCAGCGCGTCCACCTGCGGGCGTTTCTGGATTGA
PROTEIN sequence
Length: 469
MTKTMKTKRRRRSPAKPKATGGLCADPLREYLSQLRCCPLLSAEEEAKIARELQLARRRLRRVLLSNHYMLLGAVDVLRDVQRGRQRADRVLETTVFDRSQYGEVTARIPQVVWRLERLTARNRRDAARLGGPASPALRRPYARRLKTRCRAAAELVWDAKLRLKTIYPRWRELCAIAERMQSLDRAGRRPGGAHVEQQRELARLIELTGVRPHVLARWVTLTKALLARYEAIKHRLTRHNLRLVVSIAKHYARKNPDLLDLIQEGNTGLLKAADKFQPLGYRFSTYATWWIKQSITKSLVEHNGMIVLPREKLRSLVRFQKSRRQWIERNWRHPTVEEEIEACGLPERDAATLLSVDRPLLSLDTAGPDIEGTLGELVEDKHHDAPIDDLNRQALKELVHEVLVGLKDRERQVIELRFGLADQQFRTLDEVGALLGVSGERVRQIERRAVEKLRRSKQRVHLRAFLD*