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GOSHIP-P18_170_1_13_153S_1017m_2_706

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_706_1
unknown

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comp(1..111)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_706_2
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(92..436)
-----------------
DNA (345bp)
protein (115aa)
exodeoxyribonuclease III
Putative exodeoxyribonuclease iii protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CUD4_9RHIZ
Exodeoxyribonuclease III (Xth) {ECO:0000313|EMBL:EDQ35193.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EDQ35193.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_3
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(570..1208)
-----------------
DNA (639bp)
protein (213aa)
outer membrane lipoprotein carrier protein LolA
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MAK1_9PROT
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_4
RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1281..3647)
-----------------
DNA (2367bp)
protein (789aa)
ftsK; FtsK protein
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000378700A
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
GOSHIP-P18_170_1_13_153S_1017m_2_706_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3659..4843)
-----------------
DNA (1185bp)
protein (395aa)
aatC; aspartate aminotransferase
Aspartate aminotransferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGZ8_AZOBR
Aspartate aminotransferase {ECO:0000313|EMBL:CCC96717.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCC96717.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_6
RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4986..6290)
-----------------
DNA (1305bp)
protein (435aa)
ammonium transporter
Ammonium transporter n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YBZ1_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
GOSHIP-P18_170_1_13_153S_1017m_2_706_7
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6545..7924)
-----------------
DNA (1380bp)
protein (460aa)
amidase
Amidase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28VB9_JANSC
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases {ECO:0000313|EMBL:CDO59734.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CDO59734.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_8
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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8118..9350
-----------------
DNA (1233bp)
protein (411aa)
putative 2-polyprenyl-6-methoxyphenol 4-hydroxylase[Include FAD dependent oxidoreductase domain]
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3B547
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:GAK34842.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9353..9718)
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B561C8
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:EWY42412.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_10
RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9722..9934)
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A52826
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_706_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10006..10656)
-----------------
DNA (651bp)
protein (217aa)
peptidase S16 lon protein
ATP-dependent protease La domain-containing protein LonD n=1 Tax=Oceanibaculum indicum P24 RepID=K2JVF3_9PROT
ATP-dependent protease La domain-containing protein LonD {ECO:0000313|EMBL:EKE78547.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10662..11573)
-----------------
DNA (912bp)
protein (304aa)
thioredoxin
Thioredoxin-related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXP6_9PROT
Thioredoxin-related protein {ECO:0000313|EMBL:EDP62830.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_trna_1
unknown

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11960..12031
-----------------
DNA (72bp)
transferRNA Gly
GOSHIP-P18_170_1_13_153S_1017m_2_706_13
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12096..12653)
-----------------
DNA (558bp)
protein (186aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBB8_HYPSM
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_14
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12715..14301)
-----------------
DNA (1587bp)
protein (529aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LX50_9PROT
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
GOSHIP-P18_170_1_13_153S_1017m_2_706_15
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14364..16226)
-----------------
DNA (1863bp)
protein (621aa)
nucleoside-diphosphate sugar epimerase
Nucleoside-diphosphate sugar epimerase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z0I1_9PROT
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
GOSHIP-P18_170_1_13_153S_1017m_2_706_16
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16299..16640)
-----------------
DNA (342bp)
protein (114aa)
putative UDP-N-acetylmuramyl pentapeptide phosphotransferase
Putative UDP-N-acetylmuramyl pentapeptide phosphotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5F2_9PROT
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:KIL97819.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Displaying 17 items

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