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bjp_ig2157_scaffold_3505_7

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: 4183..5109

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma-54 factor (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 242.0
  • Bit_score: 151
  • Evalue 3.00e-34
RNA polymerase sigma-54 factor n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQ77_DINSH similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 242.0
  • Bit_score: 151
  • Evalue 1.10e-33
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluv similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 244.0
  • Bit_score: 164
  • Evalue 2.20e-37

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Taxonomy

Defluviimonas sp. 20V17 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGCGCGGCGCGGCAGTCTCTCGCTCGGGATGCGGCAGCGCGCGGGGCTGATGCCCGCGCTGGCCGAAAGCCTCGCCGTGCTGCGCATGCCGCTCGCCGATCTCGCCGAGTTCCTGTCCCGCGAGGCGGATGAGAATCCGCTCCTCGATTACCGCCCGCCCCCGCTGCCTGCCGGGGGAAGCGGTGGCATCGACAGCTCCGTGCTAGCTGCATCCGAGAGCCGCGGCGCCTTCCTGCGCCGCCAGATCGCGGAGCAACGCCTTGCACCGGATGTGCGCGCGGTGGCCGATTACCTGACCGAGGAACTGTCCGAAGAGGGGTTTCTCACTGCGCCCTGCGACGAGATCGCGGCGCGGCTGGGCCTTCCCGAGGCACTGATCGCGGCAGGGCTCGCCGCGCTCCAGTCCTGCGAGCCCACCGGCATCGGTGCGCGCGACCTGGGCGAGTGCCTGCGGCTCCAGCTTGCCGAGGCGGGAATTGCGCCTGCCGTGGCCACGGCCCTGACGGCGCATCTGCCTGCCGCGGCACGGAAGGACTGGCGCGCCATTGCCCGTGCGAGCGGCCTGCCGCCCGCCGAGATCGCGGCTGGGGGCGCGTGCCTGGCCCGGCTCTCGCCGCGGCCCTTGCCGCTCGATACGTCCACACGGCGCGGCGCTACCTCGCAGAGCGGCGCGCCCGGGCGCGGCAGCTTGTCGGTGCGATGGCCTACCGGCGCCGAACGCTGCTGCGCGTGGCGCGCGCCATGGTGGCCCGCCAGCAGGCCTTCTTCACCGAGGGGCCCGGCCATCTGCGGCCGCTCACCCGCGCTGCGCTGGCGGCGGAACTGGGGCTGCATGTCTCGACGGTTGGTCGCGCGCTTGCCGACAAGGCGGTTGCCTCGCCTCAGGGCACGCATCCAGCGAGCCTGTTCTTTCCCGCAGGCGTAG
PROTEIN sequence
Length: 309
MARRGSLSLGMRQRAGLMPALAESLAVLRMPLADLAEFLSREADENPLLDYRPPPLPAGGSGGIDSSVLAASESRGAFLRRQIAEQRLAPDVRAVADYLTEELSEEGFLTAPCDEIAARLGLPEALIAAGLAALQSCEPTGIGARDLGECLRLQLAEAGIAPAVATALTAHLPAAARKDWRAIARASGLPPAEIAAGGACLARLSPRPLPLDTSTRRGATSQSGAPGRGSLSVRWPTGAERCCAWRAPWWPASRPSSPRGPAICGRSPALRWRRNWGCMSRRLVARLPTRRLPRLRARIQRACSFPQA*