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bjp_ig2157_scaffold_4552_2

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(537..1448)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1461693 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 268.0
  • Bit_score: 348
  • Evalue 1.10e-92
Ribonuclease R n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CU37_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 268.0
  • Bit_score: 346
  • Evalue 3.70e-92
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 255.0
  • Bit_score: 343
  • Evalue 5.20e-92

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Taxonomy

Actibacterium atlanticum → Actibacterium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGGCGGGTTGCCGACACGCGATGAACTGCTGGCCTGGATTGCCGGAAATCCCGGCCTCGCCTCCAAGCGCGACATCGCGCGCGCCTTCGGCCTGAAGGGGGCCGAACGGGTGGAGCTGAAGCGGCTCTTGCGCGAACTGGCCGAAGAGGGCCAGCTTGAGAAGAGGCGGCGCAGCTACCGCGACCCGGAGCGGTTGCCGCCGGTGGCGGTGCTGGAGGTAACGGGGCCCGACGCCGAGGGCGACCTCTGGGCGAGGCCGCTCGACTGGACAGGCGAGGGCGCGCGCCCGCGCATCCTCCTGATCCCGCGTGCGGGGGATCCGGCGCTGGGCCGCGGCGAGCGCATCCTGGCGCGGCTGACCGAGGCGGCGGGCGGGGAGGGTCACAGCCACGAGGCGCGGCTCATCCGGCGCATCGCGCTCCAGCCCCGGCGGCTCCTGGGCATCTATCGCGCCGGGGCCGAGGGCGGGCGGATCGTGCCGATCGACAAGGGCGCGCAGGACGAGTGGCTGGTGCGCCCGGGCGATGCGTCTGGCGCCGAGGAAGGCGAGCTAGTCGAGGCAGAGCAGGCGGGCCCGAAATCGCGGCTGGGCCTGCCGCGGGCGCGGGTGGTCGAACGGCTCGGCGACCCGGCGGCGCCGCGTGCCGTCTCGCTCATCGCCATTCATGCGCACGGTATCCCCGACGCCTTTCCCGAGACGGTGCTGGCCCAGGCCGAGGCCGTGGAGTCGGACCCGGGCATCGCCCGCGAGGATCTGCGCTCTGGGTGGCCATCGCTGATGTTGCGGCCCATGTGCGCCCGGGCAGTGTGCTCGACCGCGAGGCGCGCAACCGCGGCAATTCCACCTATTTCCCCGACCGCGTGGTGCCGATGCTGCCCGAGCGGCTGTCGGCCGATCTCTGCTCTCTGA
PROTEIN sequence
Length: 304
MGGLPTRDELLAWIAGNPGLASKRDIARAFGLKGAERVELKRLLRELAEEGQLEKRRRSYRDPERLPPVAVLEVTGPDAEGDLWARPLDWTGEGARPRILLIPRAGDPALGRGERILARLTEAAGGEGHSHEARLIRRIALQPRRLLGIYRAGAEGGRIVPIDKGAQDEWLVRPGDASGAEEGELVEAEQAGPKSRLGLPRARVVERLGDPAAPRAVSLIAIHAHGIPDAFPETVLAQAEAVESDPGIAREDLRSGWPSLMLRPMCARAVCSTARRATAAIPPISPTAWCRCCPSGCRPISAL*