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bjp_ig2157_scaffold_11620_6

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(4381..4740)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1469613 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 117.0
  • Bit_score: 150
  • Evalue 1.30e-33
Ribonuclease R n=1 Tax=Roseovarius sp. 217 RepID=A3W0J7_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 117.0
  • Bit_score: 147
  • Evalue 1.00e-32
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 118.0
  • Bit_score: 144
  • Evalue 1.80e-32

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Taxonomy

Rhodovulum sp. NI22 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GGCCGCATCGCCGGGATCGCGCGTTTCGGCGTCTTCGTGCGGCTGGCCGAGAGCGGGGCAGAGGGCTTCATCCCGATCTCGACGCTAGGGCGCGAGTATTTCCACTACGACCGCGACAGCCAGACCCTGATGGGAGAACATTCGGGCCTGACGCTGGGCCTGGGCACGCCGGTTCTGGTGCGCCTCGCCGAGGCGGTTCCGGTGACCGGCGGGCTGATCCTGGAATTGCTGGAGGTGGCGGGTGCGACGATGCCCCGCGGGCCGCAGCGCAGTGCCCGCGGCGGACCACGGCGCAAGCTGGGCAAGCACCGGCAGAAGGCGCAGAAGCTAAAGCGCAAGTCGGGCCGCCGCCCGGGCTGA
PROTEIN sequence
Length: 120
GRIAGIARFGVFVRLAESGAEGFIPISTLGREYFHYDRDSQTLMGEHSGLTLGLGTPVLVRLAEAVPVTGGLILELLEVAGATMPRGPQRSARGGPRRKLGKHRQKAQKLKRKSGRRPG*