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bjp_Ig5326_Hor_140_2015_Hydrogenophilales_65_5

bjp_ig5326_Hydrogenophilales_65_5
In projects: 07V140M03_2015_Ig5326  |  horonobe_genomes

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 661 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5326_scaffold_2183
Species: Thiobacillus denitrificans (50%)
6 7616 bp 64.19 5.51 95.12
Ig5326_scaffold_2410
Species: GWE1_Thiobacillus_62_9_curated (77.78%)
9 7066 bp 64.58 5.52 95.10
Ig5326_scaffold_16194
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1177 bp 66.53 4.08 95.07
Ig5326_scaffold_8546
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 2384 bp 61.16 5.35 95.01
Ig5326_scaffold_8928
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 2275 bp 68.97 6.07 94.95
Ig5326_scaffold_3732
Order: Hydrogenophilales (100%)
6 5043 bp 65.60 5.26 94.94
Ig5326_scaffold_7260
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 2816 bp 65.02 5.17 94.92
Ig5326_scaffold_10342
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1947 bp 67.13 6.24 94.92
Ig5326_scaffold_5656
Species: GWE1_Thiobacillus_62_9_curated (100%)
4 3582 bp 62.62 6.16 94.89
Ig5326_scaffold_12038
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
2 1644 bp 69.65 4.11 94.89
Ig5326_scaffold_4856
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 4089 bp 65.62 5.39 94.86
Ig5326_scaffold_5057
Species: GWE1_Thiobacillus_62_9_curated (100%)
6 3952 bp 66.55 5.62 94.81
Ig5326_scaffold_11529
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1734 bp 62.92 5.02 94.81
Ig5326_scaffold_1421
Species: Thiobacillus denitrificans (70%)
10 10124 bp 67.10 5.73 94.79
Ig5326_scaffold_2272
Species: GWE1_Thiobacillus_62_9_curated (58.33%)
12 7391 bp 63.36 5.64 94.78
Ig5326_scaffold_9492
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 2128 bp 63.53 5.85 94.74
Ig5326_scaffold_3900
Species: GWE1_Thiobacillus_62_9_curated (100%)
5 4880 bp 66.15 5.29 94.73
Ig5326_scaffold_15180
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1267 bp 64.88 4.03 94.71
Ig5326_scaffold_15046
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1280 bp 63.67 3.87 94.69
Ig5326_scaffold_11658
Order: Hydrogenophilales (100%)
3 1711 bp 67.39 6.05 94.68
Ig5326_scaffold_3664
Species: CG_Hydro_01 (80%)
5 5113 bp 63.68 5.25 94.64
Ig5326_scaffold_6651
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 3073 bp 65.08 5.52 94.60
Ig5326_scaffold_6081
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 3340 bp 66.41 6.51 94.58
Ig5326_scaffold_14726
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1310 bp 65.42 3.66 94.58
Ig5326_scaffold_7073
Species: GWE1_Thiobacillus_62_9_curated (100%)
5 2893 bp 62.25 6.58 94.57
Ig5326_scaffold_4541
Order: Hydrogenophilales (75%)
4 4305 bp 63.97 5.61 94.56
Ig5326_scaffold_10259
Order: Hydrogenophilales (66.67%)
3 1965 bp 64.38 4.96 94.55
Ig5326_scaffold_13369
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1463 bp 68.35 6.56 94.53
Ig5326_scaffold_16879
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1124 bp 62.28 4.27 94.48
Ig5326_scaffold_4831
Order: Hydrogenophilales (100%)
9 4109 bp 66.71 5.66 94.48
Ig5326_scaffold_18072
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1039 bp 63.23 4.48 94.42
Ig5326_scaffold_8406
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2425 bp 66.47 5.26 94.39
Ig5326_scaffold_2099
Order: Hydrogenophilales (77.78%)
9 7825 bp 64.64 6.75 94.39
Ig5326_scaffold_8146
Order: Hydrogenophilales (66.67%)
3 2505 bp 64.35 6.77 94.37
Ig5326_scaffold_4629
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 4255 bp 63.15 5.64 94.34
Ig5326_scaffold_8272
Species: Thiobacillus denitrificans (66.67%)
3 2468 bp 63.70 6.26 94.33
Ig5326_scaffold_2658
Order: Hydrogenophilales (100%)
8 6600 bp 65.02 5.50 94.32
Ig5326_scaffold_9583
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 2109 bp 65.34 4.77 94.31
Ig5326_scaffold_8425
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 2421 bp 64.89 5.89 94.30
Ig5326_scaffold_4253
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 4548 bp 66.42 5.38 94.26
Ig5326_scaffold_14271
Order: Hydrogenophilales (75%)
4 1359 bp 58.20 3.75 94.26
Ig5326_scaffold_3363
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
6 5492 bp 65.44 5.33 94.23
Ig5326_scaffold_3416
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 5423 bp 63.51 4.84 94.21
Ig5326_scaffold_13376
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1462 bp 62.04 6.77 94.19
Ig5326_scaffold_5587
Order: Hydrogenophilales (83.33%)
6 3625 bp 65.27 5.67 94.18
Ig5326_scaffold_2874
Species: GWE1_Thiobacillus_62_9_curated (57.14%)
7 6218 bp 66.31 5.64 94.18
Ig5326_scaffold_5507
Order: Hydrogenophilales (100%)
5 3668 bp 63.30 6.42 94.14
Ig5326_scaffold_2551
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
9 6791 bp 63.48 5.46 94.10
Ig5326_scaffold_3449
Species: GWE1_Thiobacillus_62_9_curated (50%)
6 5389 bp 64.63 6.12 94.08
Ig5326_scaffold_5310
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 3782 bp 64.86 5.99 94.08
Displaying items 251-300 of 661 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.