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bjp_Ig5326_Hor_140_2015_Hydrogenophilales_65_5

bjp_ig5326_Hydrogenophilales_65_5
In projects: 07V140M03_2015_Ig5326  |  horonobe_genomes

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 661 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5326_scaffold_8514
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
4 2393 bp 63.69 5.77 92.65
Ig5326_scaffold_2542
Order: Hydrogenophilales (80%)
5 6802 bp 65.04 4.90 92.66
Ig5326_scaffold_1392
Species: GWE1_Thiobacillus_62_9_curated (81.25%)
16 10268 bp 62.53 5.23 92.71
Ig5326_scaffold_10628
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1888 bp 63.67 4.85 92.80
Ig5326_scaffold_1387
Species: GWE1_Thiobacillus_62_9_curated (60%)
10 10280 bp 66.10 5.71 92.80
Ig5326_scaffold_1855
Order: Hydrogenophilales (90.91%)
11 8533 bp 63.46 4.96 92.80
Ig5326_scaffold_4668
Species: GWE1_Thiobacillus_62_9_curated (50%)
6 4228 bp 66.25 5.14 92.81
Ig5326_scaffold_12060
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1642 bp 65.41 5.02 92.81
Ig5326_scaffold_11477
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
3 1742 bp 66.76 5.77 92.82
Ig5326_scaffold_6827
Species: GWE1_Thiobacillus_62_9_curated (100%)
5 2999 bp 62.92 5.35 92.83
Ig5326_scaffold_6321
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 3228 bp 62.67 5.39 92.84
Ig5326_scaffold_6413
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 3179 bp 66.18 4.81 92.86
Ig5326_scaffold_1197
Order: Hydrogenophilales (92.31%)
13 11390 bp 65.77 6.01 92.87
Ig5326_scaffold_10757
Order: Hydrogenophilales (66.67%)
3 1866 bp 60.02 5.63 92.93
Ig5326_scaffold_2782
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
8 6353 bp 64.41 5.71 92.93
Ig5326_scaffold_5894
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3441 bp 66.96 6.54 92.94
Ig5326_scaffold_5229
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
6 3841 bp 63.19 5.55 92.94
Ig5326_scaffold_7690
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 2666 bp 65.45 5.40 92.95
Ig5326_scaffold_4614
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 4263 bp 62.82 5.28 92.96
Ig5326_scaffold_1773
Species: GWE1_Thiobacillus_62_9_curated (55.56%)
9 8776 bp 64.57 5.64 92.98
Ig5326_scaffold_12160
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1626 bp 62.85 4.43 92.99
Ig5326_scaffold_18443
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1016 bp 62.40 5.46 93.01
Ig5326_scaffold_2642
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 6640 bp 65.98 5.76 93.03
Ig5326_scaffold_7270
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 2814 bp 66.49 5.38 93.18
Ig5326_scaffold_3098
Species: GWE1_Thiobacillus_62_9_curated (80%)
5 5884 bp 66.86 6.25 93.20
Ig5326_scaffold_7092
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 2885 bp 57.71 4.63 93.28
Ig5326_scaffold_1234
Order: Hydrogenophilales (76.92%)
13 11215 bp 66.80 6.74 93.30
Ig5326_scaffold_6322
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 3227 bp 63.03 5.07 93.34
Ig5326_scaffold_8139
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 2506 bp 67.60 5.81 93.38
Ig5326_scaffold_4731
Species: GWE1_Thiobacillus_62_9_curated (60%)
5 4183 bp 65.26 5.38 93.38
Ig5326_scaffold_10152
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 1987 bp 65.63 4.98 93.46
Ig5326_scaffold_18069
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1040 bp 62.50 5.19 93.46
Ig5326_scaffold_5635
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 3595 bp 67.76 5.30 93.46
Ig5326_scaffold_10833
Species: GWE1_Thiobacillus_62_9_curated (100%)
2 1852 bp 64.47 5.83 93.47
Ig5326_scaffold_10097
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 1996 bp 66.68 5.79 93.49
Ig5326_scaffold_13366
Species: GWE1_Thiobacillus_62_9_curated (100%)
3 1463 bp 63.98 3.49 93.51
Ig5326_scaffold_4762
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 4161 bp 65.61 5.59 93.51
Ig5326_scaffold_2977
Order: Hydrogenophilales (100%)
7 6071 bp 65.77 6.08 93.54
Ig5326_scaffold_16502
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 1154 bp 59.27 5.46 93.59
Ig5326_scaffold_15000
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1285 bp 67.00 6.89 93.62
Ig5326_scaffold_9701
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2082 bp 65.66 6.12 93.66
Ig5326_scaffold_4871
Order: Hydrogenophilales (80%)
5 4080 bp 67.87 4.74 93.68
Ig5326_scaffold_7336
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 2782 bp 67.90 5.18 93.71
Ig5326_scaffold_5854
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 3463 bp 64.48 5.50 93.73
Ig5326_scaffold_8528
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2390 bp 68.03 5.84 93.77
Ig5326_scaffold_11623
Species: Thiobacillus denitrificans (50%)
2 1718 bp 63.56 6.29 93.77
Ig5326_scaffold_1902
Species: GWE1_Thiobacillus_62_9_curated (55.56%)
9 8377 bp 63.82 5.93 93.79
Ig5326_scaffold_14752
Species: GWE1_Thiobacillus_62_9_curated (75%)
4 1308 bp 63.69 5.05 93.81
Ig5326_scaffold_3133
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
9 5835 bp 64.13 5.19 93.83
Ig5326_scaffold_12594
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1563 bp 64.94 4.70 93.86
Displaying items 301-350 of 661 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.