ggKbase home page

BML_08182015_1_5m_scaffold_9_prodigal-single

Search features with annotation key words

Displaying items 151-180 of 372 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BML_08182015_1_5m_scaffold_9_prodigal-single_144
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(100642..101181)
DNA (540bp) protein (180aa)
Sigma factor for late transcription n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ20_9CAUD
Sigma factor for late transcription {ECO:0000313|EMBL:ADO97468.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_145
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(101286..101678)
DNA (393bp) protein (131aa)
Methylamine utilization protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ19_9CAUD
Methylamine utilization protein {ECO:0000313|EMBL:ADO97467.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_146
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(101683..102309)
DNA (627bp) protein (209aa)
Putative endonuclease n=2 Tax=Bacillus phage BCP78 RepID=G9J202_9CAUD
Group I intron endonuclease {ECO:0000313|EMBL:CRH81999.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_147
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(102311..103774)
DNA (1464bp) protein (488aa)
RNA-DNA + DNA-DNA helicase n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ18_9CAUD
RNA-DNA + DNA-DNA helicase {ECO:0000313|EMBL:ADO97466.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_148
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(103802..104239)
DNA (438bp) protein (146aa)
UvsY n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ16_9CAUD
UvsY {ECO:0000313|EMBL:ADO97464.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_149
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(104236..104784)
DNA (549bp) protein (183aa)
Head-proximal tip of tail tube tail completion + sheath stabilizer protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ15_9CAUD
Head-proximal tip of tail tube tail completion + sheath stabilizer protein {ECO:0000313|EMBL:ADO97463.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_150
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(104856..106286)
DNA (1431bp) protein (477aa)
Precursor of major head subunit n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ13_9CAUD
Precursor of major head subunit {ECO:0000313|EMBL:ADO97461.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_151
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(106342..107517)
DNA (1176bp) protein (392aa)
Scaffold prohead core protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ12_9CAUD
Scaffold prohead core protein {ECO:0000313|EMBL:ADO97460.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
Zinc finger-domain-containing protein
BML_08182015_1_5m_scaffold_9_prodigal-single_152
Synechococcus phage S-SKS1, Caudovirales, Viruses

Not on your lists

comp(107574..108224)
DNA (651bp) protein (217aa)
Prohead protease n=1 Tax=Synechococcus phage S-SKS1 RepID=M4QPS8_9CAUD
Prohead protease {ECO:0000313|EMBL:AGH31650.1}; TaxID=754042 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Synechococcus phage S-SKS1.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_153
unknown

Not on your lists

comp(108230..108496)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Prochlorococcus phage P-SSM2 RepID=R9S8P6_BPPRM
BML_08182015_1_5m_scaffold_9_prodigal-single_154
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(108544..108687)
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ09_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ADO97457.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_155
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(108731..110419)
DNA (1689bp) protein (563aa)
Portal vertex protein of head n=2 Tax=Viruses RepID=E3SJ08_9CAUD
Portal vertex protein of head {ECO:0000313|EMBL:ADO97456.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_156
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(110454..111053)
DNA (600bp) protein (200aa)
Tail tube monomer n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ07_9CAUD
Tail tube monomer {ECO:0000313|EMBL:ADO97455.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_157
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(111087..113285)
DNA (2199bp) protein (733aa)
Tail sheath monomer n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ06_9CAUD
Tail sheath monomer {ECO:0000313|EMBL:ADO97454.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
phage tail sheath protein
BML_08182015_1_5m_scaffold_9_prodigal-single_158
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(113367..113612)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ05_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ADO97453.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_159
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(113612..115270)
DNA (1659bp) protein (553aa)
Terminase DNA packaging enzyme large subunit n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ04_9CAUD
Terminase DNA packaging enzyme large subunit {ECO:0000313|EMBL:ADO97452.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
hypothetical protein
BML_08182015_1_5m_scaffold_9_prodigal-single_160
Prochlorococcus phage P-RSM4, Caudovirales, Viruses

Not on your lists

comp(115289..117253)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Prochlorococcus phage P-RSM4 RepID=E3SM06_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ADO98504.1}; TaxID=444862 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Prochlorococcus phage P-RSM4.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_161
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(117278..117706)
DNA (429bp) protein (143aa)
Terminase DNA packaging enzyme small subunit n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ00_9CAUD
Terminase DNA packaging enzyme small subunit {ECO:0000313|EMBL:ADO97448.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_162
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(117719..118720)
DNA (1002bp) protein (334aa)
Proximal tail sheath stabilization n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ9_9CAUD
Proximal tail sheath stabilization {ECO:0000313|EMBL:ADO97447.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_163
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(118763..120175)
DNA (1413bp) protein (471aa)
Neck protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ8_9CAUD
Neck protein {ECO:0000313|EMBL:ADO97446.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
fibronectin type III domain-containing protein
BML_08182015_1_5m_scaffold_9_prodigal-single_164
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(120181..121026)
DNA (846bp) protein (282aa)
Neck protein n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ7_9CAUD
Neck protein {ECO:0000313|EMBL:ADO97445.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_165
Cyanophage S-TIM5, Caudovirales, Viruses

Not on your lists

comp(121026..121196)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Cyanophage S-TIM5 RepID=H6WG80_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:AEZ65625.1}; TaxID=1137745 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-TIM5.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_166

Not on your lists

comp(121186..121410)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=uncultured phage MedDCM-OCT-S08-C1281 RepID=D6PI82_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:ADD95433.1}; TaxID=743568 species="Viruses; environmental samples.;" source="uncultured phage MedDCM-OCT-S08-C1281.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_167
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

comp(121414..129186)
DNA (7773bp) protein (2591aa)
Uncharacterized protein n=2 Tax=Synechococcus phage S-SSM7 RepID=M4PNP5_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH07722.1}; TaxID=682650 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage S-SSM6a.;"
hypothetical protein
BML_08182015_1_5m_scaffold_9_prodigal-single_168
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(129193..130761)
DNA (1569bp) protein (523aa)
Baseplate wedge n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ2_9CAUD
Baseplate wedge {ECO:0000313|EMBL:ADO97440.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_169
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(130781..143206)
DNA (12426bp) protein (4142aa)
Baseplate wedge initiator n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ1_9CAUD
Baseplate wedge initiator {ECO:0000313|EMBL:ADO97439.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
hypothetical protein
BML_08182015_1_5m_scaffold_9_prodigal-single_170
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(143208..145124)
DNA (1917bp) protein (639aa)
Baseplate wedge n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIZ0_9CAUD
Baseplate wedge {ECO:0000313|EMBL:ADO97438.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
BML_08182015_1_5m_scaffold_9_prodigal-single_171
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

comp(145124..145525)
DNA (402bp) protein (134aa)
Base plate wedge subunit n=1 Tax=Synechococcus phage S-SM2 RepID=E3SIY9_9CAUD
Base plate wedge subunit {ECO:0000313|EMBL:ADO97437.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
putative membrane protein
BML_08182015_1_5m_scaffold_9_prodigal-single_172
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(145553..145810)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002001EC0
Uncharacterized protein {ECO:0000313|EMBL:KEF40757.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
hypothetical protein
BML_08182015_1_5m_scaffold_9_prodigal-single_173
Synechococcus phage S-CAM1, Caudovirales, Viruses

Not on your lists

comp(145824..146501)
DNA (678bp) protein (226aa)
PurM n=1 Tax=Synechococcus phage S-CAM1 RepID=M4QIJ7_9CAUD
PurM {ECO:0000313|EMBL:AGH26752.1}; TaxID=754037 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-CAM1.;"
Displaying items 151-180 of 372 in total

View Taxonomy