ggKbase home page

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single

Search features with annotation key words

Displaying items 91-120 of 471 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_91
unknown

Not on your lists

comp(85061..85333)
DNA (273bp) protein (91aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_92

Not on your lists

comp(85343..86263)
DNA (921bp) protein (307aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL72964.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_93
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(86263..87243)
DNA (981bp) protein (327aa)
Ser/Thr protein phosphatase family protein id=2799615 bin=GWB1_Spirochaetes_59_5 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
DNA repair exonuclease
Tax=GWB1_Spirochaetes_59_5_curated
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_94
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(87250..88458)
DNA (1209bp) protein (403aa)
ATPase involved in DNA repair-like protein id=2799606 bin=GWB1_Spirochaetes_59_5 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_95
Corynebacterium falsenii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(88458..89849)
DNA (1392bp) protein (464aa)
Protein RecA n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVK1_9CORY
recombinase RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44353.;"
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_96
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(89846..90499)
DNA (654bp) protein (218aa)
id=2799597 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_97
unknown

Not on your lists

comp(90515..91378)
DNA (864bp) protein (288aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_98
unknown

Not on your lists

comp(91564..92310)
DNA (747bp) protein (249aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_99
unknown

Not on your lists

comp(92314..92718)
DNA (405bp) protein (135aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_100
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(92730..94940)
DNA (2211bp) protein (737aa)
Helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2SVZ6_9FIRM
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_101
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94940..96865)
DNA (1926bp) protein (642aa)
DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
DNA ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=DNLJ_SORC5
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_102

Not on your lists

comp(96869..97507)
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL28429.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_103
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97525..100599)
DNA (3075bp) protein (1025aa)
ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ADE14746.1}; EC=1.17.4.2 {ECO:0000313|EMBL:ADE14746.1};; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Ribonucleoside-triphosphate reductase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1W3_NITHN
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_104

Not on your lists

comp(100603..101574)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R3S2_RIEAN
Uncharacterized protein {ECO:0000313|EMBL:KKL12875.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_105
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101578..102537)
DNA (960bp) protein (320aa)
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AJE03691.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
DNA polymerase III, delta prime subunit id=1947270 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_106
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102736..103413)
DNA (678bp) protein (226aa)
Tax=CG_Delta_07
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_107
unknown

Not on your lists

comp(103421..103669)
DNA (249bp) protein (83aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_108
unknown

Not on your lists

comp(103679..104050)
DNA (372bp) protein (124aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_109
unknown

Not on your lists

comp(104579..105001)
DNA (423bp) protein (141aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_110
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105001..106647)
DNA (1647bp) protein (549aa)
60 kDa chaperonin n=3 Tax=Burkholderiales RepID=D9Y8E3_9BURK
molecular chaperone GroEL
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_111
unknown

Not on your lists

comp(106650..107045)
DNA (396bp) protein (132aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_trna_40
unknown

Not on your lists

comp(107157..107244)
DNA (88bp)
transferRNA Ser
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_trna_39
unknown

Not on your lists

comp(107250..107335)
DNA (86bp)
transferRNA Pseudo
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_112

Not on your lists

comp(107362..108960)
DNA (1599bp) protein (533aa)
von Willebrand factor type A n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFP8_ANASK
Uncharacterized protein {ECO:0000313|EMBL:KKN60311.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
von Willebrand factor A
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_113
unknown

Not on your lists

comp(109264..109593)
DNA (330bp) protein (110aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_trna_38
unknown

Not on your lists

comp(109766..109840)
DNA (75bp)
transferRNA Pro
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_114
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109873..110403)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2J9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39004.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_trna_37
unknown

Not on your lists

comp(110466..110550)
DNA (85bp)
transferRNA Leu
P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_115
unknown

Not on your lists

111271..111549
DNA (279bp) protein (93aa)

This feature has no annotations

P0_An_pond3_S8_170907_scaffold_156969_prodigal-single_trna_36
unknown

Not on your lists

comp(111547..111632)
DNA (86bp)
transferRNA Leu
Displaying items 91-120 of 471 in total

View Taxonomy