ggKbase home page

LacPavin_0818_WC40_scaffold_575784_prodigal-single

Search features with annotation key words

Displaying items 91-120 of 557 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LacPavin_0818_WC40_scaffold_575784_prodigal-single_91
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(62883..63683)
DNA (801bp) protein (267aa)
id=2799763 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_92
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(63716..65146)
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
PAS domain S-box n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UL20_9CHRO
PAS domain S-box
LacPavin_0818_WC40_scaffold_575784_prodigal-single_93
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65174..65608)
DNA (435bp) protein (145aa)
Response regulator receiver protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPN4_THISH
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACL72201.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
LacPavin_0818_WC40_scaffold_575784_prodigal-single_94
unknown

Not on your lists

comp(65609..66088)
DNA (480bp) protein (160aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_95
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(66144..66689)
DNA (546bp) protein (182aa)
id=2799759 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_96
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(66704..68266)
DNA (1563bp) protein (521aa)
id=2799758 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_97
unknown

Not on your lists

comp(68296..68460)
DNA (165bp) protein (55aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_98
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(68447..70162)
DNA (1716bp) protein (572aa)
Gp14 id=3256083 bin=GWB1_Spirochaetes_59_5 species=Bacillus phage G genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_99
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(70155..70601)
DNA (447bp) protein (149aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=2842462 bin=GWB1_Spirochaetes_59_5 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_100
unknown

Not on your lists

comp(70571..70858)
DNA (288bp) protein (96aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_101
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(70859..72784)
DNA (1926bp) protein (642aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent id=2842462 bin=GWB1_Spirochaetes_59_5 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_102

Not on your lists

comp(72781..73740)
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL79751.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LacPavin_0818_WC40_scaffold_575784_prodigal-single_103
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(73737..74534)
DNA (798bp) protein (266aa)
id=2842469 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_104
unknown

Not on your lists

comp(74542..75120)
DNA (579bp) protein (193aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_105
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(75156..77312)
DNA (2157bp) protein (719aa)
id=3274262 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_106
unknown

Not on your lists

comp(77309..77575)
DNA (267bp) protein (89aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_107
unknown

Not on your lists

77633..78091
DNA (459bp) protein (153aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_108
unknown

Not on your lists

78093..78323
DNA (231bp) protein (77aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_109
unknown

Not on your lists

78320..78580
DNA (261bp) protein (87aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_110
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

78590..79066
DNA (477bp) protein (159aa)
cholinephosphate cytidylyltransferase, putative id=138176 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
D-beta-D-heptose 1-phosphate adenosyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_111
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

79145..79651
DNA (507bp) protein (169aa)
id=3954328 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=GWB1_Spirochaetes_59_5_curated
LacPavin_0818_WC40_scaffold_575784_prodigal-single_112
unknown

Not on your lists

79651..79866
DNA (216bp) protein (72aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_113

Not on your lists

79863..81023
DNA (1161bp) protein (387aa)
PREDICTED: uncharacterized protein LOC101235494 n=1 Tax=unknown RepID=UPI0002B4C17D
Uncharacterized protein {ECO:0000313|EMBL:KKN60288.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase family protein associated with various cellular activities (AAA)
LacPavin_0818_WC40_scaffold_575784_prodigal-single_114
unknown

Not on your lists

81085..81486
DNA (402bp) protein (134aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_115
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81483..82496
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXM4_9DELT
RnlB RNA ligase 2 {ECO:0000313|EMBL:KIG18415.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
LacPavin_0818_WC40_scaffold_575784_prodigal-single_116
unknown

Not on your lists

82550..83038
DNA (489bp) protein (163aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_117
unknown

Not on your lists

83041..83265
DNA (225bp) protein (75aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_118
unknown

Not on your lists

83262..83471
DNA (210bp) protein (70aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_119
unknown

Not on your lists

comp(83442..83657)
DNA (216bp) protein (72aa)

This feature has no annotations

LacPavin_0818_WC40_scaffold_575784_prodigal-single_120
unknown

Not on your lists

comp(83677..83832)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 91-120 of 557 in total

View Taxonomy