ggKbase home page

M01_scaffold_13_prodigal-single

Search features with annotation key words

Displaying items 181-210 of 340 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
M01_scaffold_13_prodigal-single_trna_7
unknown

Not on your lists

comp(107575..107659)
DNA (85bp)
transferRNA Pseudo
M01_scaffold_13_prodigal-single_trna_6
unknown

Not on your lists

comp(108226..108301)
DNA (76bp)
transferRNA Glu
M01_scaffold_13_prodigal-single_172
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(108622..108894)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003635408
Uncharacterised protein {ECO:0000313|EMBL:CRH73007.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
M01_scaffold_13_prodigal-single_trna_5
unknown

Not on your lists

comp(109703..109793)
DNA (91bp)
transferRNA Ser
M01_scaffold_13_prodigal-single_trna_4
unknown

Not on your lists

comp(109950..110027)
DNA (78bp)
transferRNA Val
M01_scaffold_13_prodigal-single_173
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110161..110607)
DNA (447bp) protein (149aa)
Phage holin, LL-H family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP36_9FIRM
Phage holin, LL-H family {ECO:0000313|EMBL:EHM52931.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
M01_scaffold_13_prodigal-single_174
unknown

Not on your lists

comp(110970..111440)
DNA (471bp) protein (157aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_175
Bacillus pumilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(111443..111916)
DNA (474bp) protein (158aa)
Appr-1-p processing enzyme family, putative n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4ADL3_BACPU
Uncharacterized protein {ECO:0000313|EMBL:KIL12097.1}; TaxID=1408 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pumilus (Bacillus mesentericus).;"
Appr-1-p processing protein
M01_scaffold_13_prodigal-single_176
unknown

Not on your lists

comp(111928..112203)
DNA (276bp) protein (92aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_trna_3
unknown

Not on your lists

comp(112323..112398)
DNA (76bp)
transferRNA Arg
M01_scaffold_13_prodigal-single_177
unknown

Not on your lists

comp(112404..112703)
DNA (300bp) protein (100aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_178
unknown

Not on your lists

comp(112850..113212)
DNA (363bp) protein (121aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_179
unknown

Not on your lists

comp(113205..113516)
DNA (312bp) protein (104aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_trna_2
unknown

Not on your lists

comp(113549..113621)
DNA (73bp)
transferRNA Pro
M01_scaffold_13_prodigal-single_trna_1
unknown

Not on your lists

comp(113777..113862)
DNA (86bp)
transferRNA Leu
M01_scaffold_13_prodigal-single_180
unknown

Not on your lists

comp(114194..114493)
DNA (300bp) protein (100aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_181
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114480..115007)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L181_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67026.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
M01_scaffold_13_prodigal-single_182
unknown

Not on your lists

comp(115022..115288)
DNA (267bp) protein (89aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_183

Not on your lists

comp(115458..116282)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D2FA
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75603.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
hypothetical protein
M01_scaffold_13_prodigal-single_184
unknown

Not on your lists

comp(116272..116754)
DNA (483bp) protein (161aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_185
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116760..117353)
DNA (594bp) protein (198aa)
Numod4 motif family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ28_9FIRM
Numod4 motif family protein {ECO:0000313|EMBL:CDD80334.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
numod4 motif family protein
M01_scaffold_13_prodigal-single_186
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117513..118757)
DNA (1245bp) protein (415aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03887.1}; EC=2.4.2.30 {ECO:0000313|EMBL:KIR03887.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE64_9CLOT
hypothetical protein
M01_scaffold_13_prodigal-single_187
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(118860..119576)
DNA (717bp) protein (239aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ20620.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
Putative uncharacterized protein id=3012028 bin=GWC1_Spirochaetes_27_15 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
M01_scaffold_13_prodigal-single_188
unknown

Not on your lists

comp(119597..119809)
DNA (213bp) protein (71aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_189

Not on your lists

comp(119824..121509)
DNA (1686bp) protein (562aa)
UvrD/REP helicase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZU4_DICTD
Marine sediment metagenome DNA, contig: S01H1_L06386 {ECO:0000313|EMBL:GAF75508.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
UvrD/REP helicase
M01_scaffold_13_prodigal-single_190
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(121515..122633)
DNA (1119bp) protein (373aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
Cysteine desulfurase NifS n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KB49_9FIRM
cysteine desulfurase NifS
M01_scaffold_13_prodigal-single_191
unknown

Not on your lists

comp(122630..122809)
DNA (180bp) protein (60aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_192
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122811..123404)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MQF9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35995.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
M01_scaffold_13_prodigal-single_193
unknown

Not on your lists

comp(123394..123657)
DNA (264bp) protein (88aa)

This feature has no annotations

M01_scaffold_13_prodigal-single_194
unknown

Not on your lists

comp(123654..123914)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 181-210 of 340 in total

View Taxonomy