ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

Rifle_16ft_4_minimus_37632_prodigal-single_385

Organism: RIF_PHAGE_29_7

RP 0 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: 218913..220019

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4144475 bin=GWF2_Ignavibacteria_33_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 201.0
  • Bit_score: 142
  • Evalue 4.50e-31
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 201.0
  • Bit_score: 129
  • Evalue 1.90e-27
Tax=GWF2_RIF_IGX_33_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 201.0
  • Bit_score: 142
  • Evalue 6.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_RIF_IGX_33_9_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAAAAACACAGGAAAAATTTCAGCAATCAAATTGGCTCCATTATATTCTTTAATGGGGAAAGTAAAAAATGATAAGTTAAACGTAAGAGTATTTCCACTTACCAAAGCTATGCGAAAAGGGAAAGATTGGTCATACCCATCAAAATCAGGTGCTAAAAAAATATCGAATGATAGAATTGGAATAGTTGATATTTTAAATTTAAGTGGAGAAAACATAGTTTTTTTGGGTTATTGTTTAAAGTCAGGAATTAATTCATTAAATAAATTGATTGAAGTTACATTTGCTTCTTCTAAAGAAAAAAATTATAAAATCAATAAATTGGTTAAACCTGCAAAATCCAGCACTGTTACTCCTGAAAAAGAAGTTAAACCGGTTCTTAAAGAAGTTTTAACTAAACCAGAGGAAGTTTTAACCGTAACAGAAGTTGAACAAATAATTNAAGAAGTCGCAACGAAAGAAAATTCTGTTGCTACAAAAGTTTTTTCTAAAATAGATCAAGAAGATATTAACGCTGTAAATGAAATTTTATCTGGAAAAAAAGAAAAATTTTCTGTTTTATATAAACGTTATTATGCTATAATAAATTATAAATATACTTCAAGTTTAAAATTTGATAAAGATTTGGCAGATGACCTAACTGCAGAGTTATTCGTTAGAGTGTTCGAAAAACTTCACCAGTACAAACCGACGTTTACGTTTAATAGCTGGATAAGCCGTATTGCTTCTAATTTTTTAATTGATTACACACGTAAAAAAAGATTGGAAACAATTTCTTTGAGTGCTGGAGTTTCTTCTGAGAAAATGAGAAACGAAGGGGATGAATATTCTTCATTTGATGTGAAAGATGATGGAACACTTAATCCAGAGGAAATATTAATTACAGAGCAAAAAAAATCTTTAATAAATAAGGCGGTAAATAAACTGGGAGAAAATTGCCGTATTATTATGAATAAACGTTTTGTTGAAGAGAAATCCTATAACGAAATCGCAGAAGAGCTTAATATTCCTTTGGGAACAATAAAAGCAACAATACATCGTGGAAAATCAGAGCTTAAATCCATTATCAAAGCTAATAGGAATGTATTTGAATCTGTGTTGTCTTAA
PROTEIN sequence
Length: 369
MKNTGKISAIKLAPLYSLMGKVKNDKLNVRVFPLTKAMRKGKDWSYPSKSGAKKISNDRIGIVDILNLSGENIVFLGYCLKSGINSLNKLIEVTFASSKEKNYKINKLVKPAKSSTVTPEKEVKPVLKEVLTKPEEVLTVTEVEQIIXEVATKENSVATKVFSKIDQEDINAVNEILSGKKEKFSVLYKRYYAIINYKYTSSLKFDKDLADDLTAELFVRVFEKLHQYKPTFTFNSWISRIASNFLIDYTRKKRLETISLSAGVSSEKMRNEGDEYSSFDVKDDGTLNPEEILITEQKKSLINKAVNKLGENCRIIMNKRFVEEKSYNEIAEELNIPLGTIKATIHRGKSELKSIIKANRNVFESVLS*