ggKbase home page

F26_scaffold_1_prodigal-single

Search features with annotation key words

Displaying items 181-210 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
F26_scaffold_1_prodigal-single_181
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(208587..209210)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK41950.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
F26_scaffold_1_prodigal-single_182
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(209227..209415)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum CFSAN001627 RepID=M2A028_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EKN43370.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
hypothetical protein
F26_scaffold_1_prodigal-single_183
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

209583..210389
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003660A7A
Uncharacterized protein {ECO:0000313|EMBL:KHS58202.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
putative plasmid partition protein
F26_scaffold_1_prodigal-single_184
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

210391..210747
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000369D080
Uncharacterised protein {ECO:0000313|EMBL:CEQ26685.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
F26_scaffold_1_prodigal-single_185
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(210764..211948)
DNA (1185bp) protein (395aa)
Protein RecA n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K207_DEHLB
recA; recombination protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
F26_scaffold_1_prodigal-single_186
unknown

Not on your lists

comp(211973..212302)
DNA (330bp) protein (110aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_187
unknown

Not on your lists

comp(212311..212604)
DNA (294bp) protein (98aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_188
unknown

Not on your lists

comp(212614..212919)
DNA (306bp) protein (102aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_189
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(212966..215413)
DNA (2448bp) protein (816aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWV9_9CLOT
F26_scaffold_1_prodigal-single_190
unknown

Not on your lists

comp(215406..215627)
DNA (222bp) protein (74aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_191
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(215637..217529)
DNA (1893bp) protein (631aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036C64C3
gyrB; DNA gyrase subunit B
F26_scaffold_1_prodigal-single_192
unknown

Not on your lists

comp(217533..217973)
DNA (441bp) protein (147aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_193
unknown

Not on your lists

comp(218745..219212)
DNA (468bp) protein (156aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_194
unknown

Not on your lists

comp(219323..220009)
DNA (687bp) protein (229aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_195
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(220070..221374)
DNA (1305bp) protein (435aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:221 RepID=R6G6B9_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
F26_scaffold_1_prodigal-single_196
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(221390..221971)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridiales RepID=B0A764_9FIRM
clpP; ATP-dependent Clp protease proteolytic subunit
F26_scaffold_1_prodigal-single_197
unknown

Not on your lists

comp(222000..222722)
DNA (723bp) protein (241aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_198
unknown

Not on your lists

comp(222788..223606)
DNA (819bp) protein (273aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_199
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(223636..224904)
DNA (1269bp) protein (423aa)
PhoH family protein n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VUC5_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EYE88061.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
PhoH-like protein
F26_scaffold_1_prodigal-single_200
unknown

Not on your lists

comp(224929..225222)
DNA (294bp) protein (98aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_201
unknown

Not on your lists

comp(225241..225726)
DNA (486bp) protein (162aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_202
unknown

Not on your lists

comp(225854..226408)
DNA (555bp) protein (185aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_203
unknown

Not on your lists

comp(226425..226526)
DNA (102bp) protein (34aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_204
unknown

Not on your lists

comp(226584..226832)
DNA (249bp) protein (83aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_205
unknown

Not on your lists

comp(226857..227189)
DNA (333bp) protein (111aa)

This feature has no annotations

F26_scaffold_1_prodigal-single_206
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(227268..228746)
DNA (1479bp) protein (493aa)
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J4R0_MARPK
Uncharacterized protein {ECO:0000313|EMBL:KFZ25997.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
hypothetical protein
F26_scaffold_1_prodigal-single_trna_13
unknown

Not on your lists

comp(229175..229291)
DNA (117bp)
transferRNA Pseudo
F26_scaffold_1_prodigal-single_trna_12
unknown

Not on your lists

comp(229791..229865)
DNA (75bp)
transferRNA Trp
F26_scaffold_1_prodigal-single_trna_11
unknown

Not on your lists

comp(229951..230026)
DNA (76bp)
transferRNA Met
F26_scaffold_1_prodigal-single_trna_10
unknown

Not on your lists

comp(230153..230228)
DNA (76bp)
transferRNA Asn
Displaying items 181-210 of 292 in total

View Taxonomy