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Ig5770_Miz_z4_200_2015_Micraarchaeota-related_53_34

ig5770_unknown_53_34
In projects: ig5770  |  mizunami_genomes

Consensus taxonomy:

Taxonomy override: Archaea

Metagenomic Context

Parent: ig5770_UNK

Properties

Avg. coverage: 33.52 Longest contig: 60.55 Kbp Bin length: 1.43 Mbp GC content: 53.42 %
Contigs count: 119 Features count: 1574 rRNAs count: 1 tRNAs count: 27

Genome completeness

near complete RP 34 / 55 MC: 3 BSCG 21 / 51 ASCG 36 / 38

Description

Intersect_07M_2015.024_&_07M_2015.053

Displaying items 1-50 of 119 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
Ig5770_scaffold_371
Domain: Archaea (54.84%)
62 60549 bp 54.28 34.81 91.42
Ig5770_scaffold_555 51 40927 bp 52.08 30.95 91.95
Ig5770_scaffold_786 47 41577 bp 54.35 36.03 88.84
Ig5770_scaffold_561 46 30268 bp 54.32 35.03 89.92
Ig5770_scaffold_220
Domain: Archaea (62.79%)
43 55596 bp 53.93 34.42 89.63
Ig5770_scaffold_313 42 44589 bp 53.77 34.42 84.85
Ig5770_scaffold_531 41 34044 bp 50.67 31.52 93.78
Ig5770_scaffold_1100 38 36825 bp 54.21 42.63 87.61
Ig5770_scaffold_673 37 38348 bp 51.75 31.75 92.69
Ig5770_scaffold_331
Phylum: Micraarchaeota (50%)
36 43194 bp 54.39 35.49 92.14
Ig5770_scaffold_1605
Domain: Archaea (58.82%)
34 33187 bp 52.94 34.20 88.72
Ig5770_scaffold_579 33 29736 bp 52.68 35.72 87.86
Ig5770_scaffold_1723
Phylum: Micraarchaeota (56.25%)
32 26268 bp 55.82 36.09 88.34
Ig5770_scaffold_499 30 32908 bp 52.82 33.81 93.79
Ig5770_scaffold_1659 27 24666 bp 54.10 35.68 90.01
Ig5770_scaffold_1635
Phylum: Micraarchaeota (50%)
26 23869 bp 55.31 34.16 88.55
Ig5770_scaffold_689 26 26208 bp 53.53 34.52 91.88
Ig5770_scaffold_946 26 20659 bp 53.58 33.22 86.34
Ig5770_scaffold_3001 25 13410 bp 53.99 28.67 81.52
Ig5770_scaffold_1004 25 34296 bp 57.77 35.08 91.53
Ig5770_scaffold_992 25 20132 bp 50.92 26.08 89.54
Ig5770_scaffold_1041 25 24608 bp 59.97 26.76 85.98
Ig5770_scaffold_1117 24 18220 bp 52.38 34.63 88.90
Ig5770_scaffold_1770 23 23133 bp 53.27 29.22 94.92
Ig5770_scaffold_702 22 25873 bp 53.75 34.80 95.07
Ig5770_scaffold_1022 22 19678 bp 51.87 36.57 89.90
Ig5770_scaffold_3653 21 8659 bp 52.70 48.61 86.72
Ig5770_scaffold_716 20 25688 bp 53.77 35.19 83.09
Ig5770_scaffold_765 20 24358 bp 53.22 33.89 91.21
Ig5770_scaffold_1493 19 18013 bp 52.84 29.05 89.82
Ig5770_scaffold_1146 18 17713 bp 51.56 34.49 93.82
Ig5770_scaffold_1439 18 20214 bp 51.01 31.17 92.85
Ig5770_scaffold_1225 18 16701 bp 53.25 34.61 91.53
Ig5770_scaffold_2426 18 12741 bp 53.23 36.13 84.33
Ig5770_scaffold_1383 17 15383 bp 53.09 35.26 92.93
Ig5770_scaffold_1157 17 17629 bp 54.91 35.52 85.04
Ig5770_scaffold_1053 17 19118 bp 54.17 33.97 92.44
Ig5770_scaffold_2569
Species: CG_Micra_05 (50%)
16 9349 bp 51.99 36.50 88.63
Ig5770_scaffold_2587 16 9289 bp 51.32 34.75 89.98
Ig5770_scaffold_4508 16 11271 bp 53.55 32.98 81.31
Ig5770_scaffold_1829 16 12303 bp 51.42 35.92 94.10
Ig5770_scaffold_2290
Domain: Archaea (71.43%)
14 10349 bp 52.29 32.76 89.89
Ig5770_scaffold_2389
Phylum: Micraarchaeota (57.14%)
14 9951 bp 52.24 33.18 81.91
Ig5770_scaffold_2563 13 9363 bp 53.55 29.96 92.47
Ig5770_scaffold_3385
Phylum: Micraarchaeota (53.85%)
13 8053 bp 51.32 36.04 85.72
Ig5770_scaffold_3682
Phylum: Micraarchaeota (50%)
12 10946 bp 52.06 34.34 85.62
Ig5770_scaffold_3491
Domain: Bacteria (50%)
12 7285 bp 52.20 21.54 98.30
Ig5770_scaffold_3027 12 9346 bp 52.18 33.56 77.84
Ig5770_scaffold_4520 12 5875 bp 55.30 17.49 88.19
Ig5770_scaffold_2560 11 9367 bp 52.23 32.86 92.40
Displaying items 1-50 of 119 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.