ggKbase home page

Ig5770_scaffold_461_24

Organism: Ig5770_Miz_z4_200_2015_OP3_39_13

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 26454..26903

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E id=1916909 bin=GWB2_CP_45_9 species=Caldicellulosiruptor hydrothermalis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 148.0
  • Bit_score: 207
  • Evalue 1.00e-50
pilB; type IV pilus biogenesis ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 140.0
  • Bit_score: 127
  • Evalue 2.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 450
ATGACCATAAGAAAAATTGTAAACAAACAATTAGGAGAGTTACTTATAGAAAGGGATGTCATTAATCAGCGCCAATTAGATGAGGCATTAACTGTTCAGAAAGAAAAAGGAGGCCTGATTGGTGAAGTATTAGTAGAATTGGGATTTGCTAAGGAAGAAGATATCGCCCAGGCTTTAACCGCTCAATATGGTTTTCCGTATTTACCTTTGGCTAACTATGAGATTAGCCCTGAAATTGTCAATATTATTCCCAGCCGCGTTGCCCGGCAATACCTGTTTATCCCCGTAGATAAAGTTGGTAATAATCTTACTCTGGCAATGTCTAATCCCCTTGATGTCCATGCAATTGAAGACGTAGAATTGTTGTTGGGTTGCAGCATACAGATATTCGTTTCTACTTTATCCGATGTCAAAGGGGCAATTGAGAAATATTACAAAGATAAAGAATAA
PROTEIN sequence
Length: 150
MTIRKIVNKQLGELLIERDVINQRQLDEALTVQKEKGGLIGEVLVELGFAKEEDIAQALTAQYGFPYLPLANYEISPEIVNIIPSRVARQYLFIPVDKVGNNLTLAMSNPLDVHAIEDVELLLGCSIQIFVSTLSDVKGAIEKYYKDKE*